Tool to detect CRAM base corruption caused by GATK issue 8768 #4178

Job	Run time
Validate generated WDLs using womtools	13m 35s
build and push gatk docker to artifacts	25m 45s
Validate script WDLs using womtools	54s
check if the environment has privileges	1s
WDL test RUN_CNV_GERMLINE_COHORT_WDL on cromwell	28m 10s
WDL test RUN_CNV_GERMLINE_CASE_WDL on cromwell	29m 32s
WDL test RUN_CNV_SOMATIC_WDL on cromwell	24m 9s
WDL test RUN_M2_WDL on cromwell	18m 5s
WDL test RUN_CNN_WDL on cromwell	17m 23s
WDL test RUN_VCF_SITE_LEVEL_FILTERING_WDL on cromwell	13m 7s
Java 17.0.6+10 build and test cloud	16m 26s
Java 17.0.6+10 build and test integration	34m 58s
Java 17.0.6+10 build and test unit	20m 40s
Java 17.0.6+10 test on docker integration	37m 28s
Java 17.0.6+10 test on docker unit	24m 21s
Java 17.0.6+10 test on docker variantcalling	33m 8s
Java 17.0.6+10 test on docker conda	32m 32s
	6h 10m 14s

Provide feedback