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VS-1335 bgzip on extract Echo Callset version (#8809) Build and Test GATK 4 #4149: Pull request #8820 synchronize by gbggrant
May 8, 2024 10:54 1h 6m 32s gg_VS-1335_BgzipOnExtractEchoCallsetVersion
gg_VS-1335_BgzipOnExtractEchoCallsetVersion
May 8, 2024 10:54 1h 6m 32s
VS-1335 bgzip on extract Echo Callset version (#8809) Build and Test GATK 4 #4148: Pull request #8820 opened by gbggrant
May 8, 2024 10:53 1h 6m 39s gg_VS-1335_BgzipOnExtractEchoCallsetVersion
gg_VS-1335_BgzipOnExtractEchoCallsetVersion
May 8, 2024 10:53 1h 6m 39s
VS-1335 bgzip on extract ah var store edition Build and Test GATK 4 #4147: Pull request #8809 synchronize by gbggrant
May 8, 2024 10:48 1h 7m 22s gg_VS-1335_BgzipOnExtractAhVarStoreEdition
gg_VS-1335_BgzipOnExtractAhVarStoreEdition
May 8, 2024 10:48 1h 7m 22s
Build and Upload GATK Nightly Docker Image Build and Upload GATK Nightly Docker Image #764: Scheduled
May 8, 2024 05:21 13m 29s master
master
May 8, 2024 05:21 13m 29s
Tool to detect CRAM base corruption caused by GATK issue 8768 carrot-test-run-from-pr-comment #4944: Issue comment #8819 (comment) created by gatk-bot
May 7, 2024 22:21 11s
May 7, 2024 22:21 11s
Tool to detect CRAM base corruption caused by GATK issue 8768 Build and Test GATK 4 #4146: Pull request #8819 opened by cmnbroad
May 7, 2024 21:49 1h 1m 51s cn_cram_fix
cn_cram_fix
May 7, 2024 21:49 1h 1m 51s
[EchoCallset] VCF max alt alleles [VS-1334] [VS-1357] Build and Test GATK 4 #4145: Pull request #8816 synchronize by mcovarr
May 7, 2024 21:42 1h 7m 30s vs_1334_vcf_max_alt_alleles_echo_callset
vs_1334_vcf_max_alt_alleles_echo_callset
May 7, 2024 21:42 1h 7m 30s
VS_1327 ensure sample ids are unique Build and Test GATK 4 #4144: Pull request #8818 synchronize by gbggrant
May 7, 2024 19:32 1h 3m 50s gg_VS-1327_EnsureSampleIdsAreUnique
gg_VS-1327_EnsureSampleIdsAreUnique
May 7, 2024 19:32 1h 3m 50s
Small fixes to Calculate Precision and Sensitivity WDL [VS-1168] Build and Test GATK 4 #4143: Pull request #8817 synchronize by rsasch
May 7, 2024 19:29 1h 5m 52s rsa_vs_1168_bge
rsa_vs_1168_bge
May 7, 2024 19:29 1h 5m 52s
VS_1327 ensure sample ids are unique Build and Test GATK 4 #4142: Pull request #8818 synchronize by gbggrant
May 7, 2024 19:28 1h 6m 30s gg_VS-1327_EnsureSampleIdsAreUnique
gg_VS-1327_EnsureSampleIdsAreUnique
May 7, 2024 19:28 1h 6m 30s
[EchoCallset] Retry with more memory VCF extract [VS-1351] carrot-test-run-from-pr-comment #4943: Issue comment #8814 (comment) created by mcovarr
May 7, 2024 19:16 12s
May 7, 2024 19:16 12s
GATK Reduced Docker Layers for ACR Build and Test GATK 4 #4141: Pull request #8808 synchronize by kevinpalis
May 7, 2024 16:30 1h 0m 40s kp_reduced_docker_layers
kp_reduced_docker_layers
May 7, 2024 16:30 1h 0m 40s
GATK Reduced Docker Layers for ACR Build and Test GATK 4 #4140: Pull request #8808 synchronize by kevinpalis
May 7, 2024 16:27 1h 23m 7s kp_reduced_docker_layers
kp_reduced_docker_layers
May 7, 2024 16:27 1h 23m 7s
Small fixes to Calculate Precision and Sensitivity WDL [VS-1168] Build and Test GATK 4 #4139: Pull request #8817 synchronize by rsasch
May 7, 2024 15:58 1h 23m 43s rsa_vs_1168_bge
rsa_vs_1168_bge
May 7, 2024 15:58 1h 23m 43s
Small fixes to Calculate Precision and Sensitivity WDL [VS-1168] Build and Test GATK 4 #4138: Pull request #8817 opened by rsasch
May 7, 2024 15:57 1h 4m 5s rsa_vs_1168_bge
rsa_vs_1168_bge
May 7, 2024 15:57 1h 4m 5s
GATK Reduced Docker Layers for ACR Build and Test GATK 4 #4137: Pull request #8808 synchronize by kevinpalis
May 7, 2024 15:11 59m 11s kp_reduced_docker_layers
kp_reduced_docker_layers
May 7, 2024 15:11 59m 11s
[ah_var_store] Retry with more memory VCF extract [VS-1351] carrot-test-run-from-pr-comment #4942: Issue comment #8812 (comment) created by mcovarr
May 7, 2024 13:28 11s
May 7, 2024 13:28 11s
Build and Upload GATK Nightly Docker Image Build and Upload GATK Nightly Docker Image #763: Scheduled
May 7, 2024 05:23 12m 1s master
master
May 7, 2024 05:23 12m 1s
[EchoCallset] VCF max alt alleles [VS-1334] [VS-1357] Build and Test GATK 4 #4136: Pull request #8816 synchronize by mcovarr
May 6, 2024 23:47 1h 6m 18s vs_1334_vcf_max_alt_alleles_echo_callset
vs_1334_vcf_max_alt_alleles_echo_callset
May 6, 2024 23:47 1h 6m 18s
[EchoCallset] Retry with more memory VCF extract [VS-1351] Build and Test GATK 4 #4135: Pull request #8814 synchronize by mcovarr
May 6, 2024 23:24 1h 6m 18s vs_1351_retry_with_more_memory_vcf_extract_echo_callset
vs_1351_retry_with_more_memory_vcf_extract_echo_callset
May 6, 2024 23:24 1h 6m 18s
[ah_var_store] Retry with more memory VCF extract [VS-1351] carrot-test-run-from-pr-comment #4941: Issue comment #8812 (comment) created by mcovarr
May 6, 2024 21:54 10s
May 6, 2024 21:54 10s
[ah_var_store] Retry with more memory VCF extract [VS-1351] Build and Test GATK 4 #4134: Pull request #8812 synchronize by mcovarr
May 6, 2024 21:52 20m 52s vs_1351_retry_with_more_memory_vcf_extract
vs_1351_retry_with_more_memory_vcf_extract
May 6, 2024 21:52 20m 52s
[ah_var_store] Retry with more memory VCF extract [VS-1351] Build and Test GATK 4 #4133: Pull request #8812 synchronize by mcovarr
May 6, 2024 21:28 1h 6m 9s vs_1351_retry_with_more_memory_vcf_extract
vs_1351_retry_with_more_memory_vcf_extract
May 6, 2024 21:28 1h 6m 9s
[ah_var_store] VCF max alt alleles [VS-1334] [VS-1357] Build and Test GATK 4 #4132: Pull request #8806 synchronize by mcovarr
May 6, 2024 18:55 1h 8m 10s vs_1334_vcf_max_alt_alleles
vs_1334_vcf_max_alt_alleles
May 6, 2024 18:55 1h 8m 10s
Allow for GT to be a nocall if GQ and PL[0] are zero instead of homre… Build and Test GATK 4 #4131: Commit 24f93b5 pushed by droazen
May 6, 2024 18:24 59m 4s master
master
May 6, 2024 18:24 59m 4s