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VS-1371 - Compress the tarball for Extract Pgen Merged #8828

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VS-1371 - Compress the tarball for Extract Pgen Merged #8828

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VS-1371 - Compress the tarball for Extract Pgen Merged
gbggrant May 10, 2024
38328f0
Be careful naming the branch in .dockstore.yml
gbggrant May 10, 2024
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1 change: 1 addition & 0 deletions .dockstore.yml
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Original file line number Diff line number Diff line change
Expand Up @@ -436,6 +436,7 @@ workflows:
- master
- ah_var_store
- EchoCallset
- gg_VS-1371_CompressTheTarballAhVarStoreVersion
- name: MergePgenHierarchicalWdl
subclass: WDL
primaryDescriptorPath: /scripts/variantstore/wdl/MergePgenHierarchical.wdl
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4 changes: 2 additions & 2 deletions scripts/variantstore/wdl/GvsUtils.wdl
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Expand Up @@ -309,7 +309,7 @@ task SplitIntervalsTarred {
fi

# Tar up the interval file directory
tar -cf interval-files.tar interval-files
tar -czf interval-files.tar.gz interval-files
>>>

runtime {
Expand All @@ -322,7 +322,7 @@ task SplitIntervalsTarred {
}

output {
File interval_files_tar = "interval-files.tar"
File interval_files_tar = "interval-files.tar.gz"
Array[String] interval_filenames = read_lines("interval_list_list.txt")
File monitoring_log = "monitoring.log"
}
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