Merge pull request #2079 from cBioPortal/sep_release

Public release studies
cBioPortal · Oct 2, 2024 · 120237b · 120237b
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diff --git a/public/brca_fuscc_2020/README.md b/public/brca_fuscc_2020/README.md
@@ -0,0 +1,17 @@
+Study Curation and Transformation README
+
+General information
+
+Curator name: Cassandra Ramage (Georgetown University)
+Reference publication: PMID: 32719455 
+Reference genome: GRCh37
+
+Clinical Data
+
+- Data retrieved from supplementary file: Table S2
+Sample size: 69 patients and samples
+
+Mutation Data
+
+- Data retrieved from: supplementary table S4
+- Variants were annotated by Genome Nexus
diff --git a/public/brca_fuscc_2020/case_lists/cases_all.txt b/public/brca_fuscc_2020/case_lists/cases_all.txt
@@ -0,0 +1,6 @@
+cancer_study_identifier: brca_fuscc_2020																																																																					
+stable_id: brca_fuscc_2020_all																																																																					
+case_list_name: All samples																																																																					
+case_list_description: All samples (69 samples)																																																																					
+case_list_category: all_cases_in_study																																																																					
+case_list_ids: 	S-F1	S-F2	S-F3	S-F4	S-F5	S-F6	S-F7	S-F8	S-F9	S-F10	S-F11	S-F12	S-F13	S-F14	S-F15	S-F16	S-F17	S-F18	S-F19	S-F20	S-F21	S-F22	S-F23	S-F24	S-F25	S-F26	S-F27	S-F28	S-F29	S-F30	S-F31	S-F32	S-F33	S-F34	S-F35	S-F36	S-F37	S-F38	S-F39	S-F40	S-F41	S-F42	S-F43	S-F44	S-F45	S-F46	S-F47	S-F48	S-F49	S-F50	S-F51	S-F52	S-F53	S-F54	S-F55	S-F56	S-F57	S-F58	S-F59	S-F60	S-F61	S-F62	S-F63	S-F64	S-F65	S-F66	S-F67	S-F68	S-F69
diff --git a/public/brca_fuscc_2020/case_lists/cases_sequenced.txt b/public/brca_fuscc_2020/case_lists/cases_sequenced.txt
@@ -0,0 +1,6 @@
+cancer_study_identifier: brca_fuscc_2020
+stable_id: brca_fuscc_2020_sequenced
+case_list_name: Samples with mutation data
+case_list_description: Samples with mutation data (69 samples)
+case_list_category: all_cases_with_mutation_data
+case_list_ids: S-F1	S-F2	S-F3	S-F4	S-F5	S-F6	S-F7	S-F8	S-F9	S-F10	S-F11	S-F12	S-F13	S-F14	S-F15	S-F16	S-F17	S-F18	S-F19	S-F20	S-F21	S-F22	S-F23	S-F24	S-F25	S-F26	S-F27	S-F28	S-F29	S-F30	S-F31	S-F32	S-F33	S-F34	S-F35	S-F36	S-F37	S-F38	S-F39	S-F40	S-F41	S-F42	S-F43	S-F44	S-F45	S-F46	S-F47	S-F48	S-F49	S-F50	S-F51	S-F52	S-F53	S-F54	S-F55	S-F56	S-F57	S-F58	S-F59	S-F60	S-F61	S-F62	S-F63	S-F64	S-F65	S-F66	S-F67	S-F68	S-F69
diff --git a/public/brca_fuscc_2020/data_clinical_patient.txt b/public/brca_fuscc_2020/data_clinical_patient.txt
diff --git a/public/brca_fuscc_2020/data_clinical_sample.txt b/public/brca_fuscc_2020/data_clinical_sample.txt
diff --git a/public/brca_fuscc_2020/data_mutations.txt b/public/brca_fuscc_2020/data_mutations.txt
diff --git a/public/brca_fuscc_2020/meta_clinical_patient.txt b/public/brca_fuscc_2020/meta_clinical_patient.txt
@@ -0,0 +1,4 @@
+cancer_study_identifier: brca_fuscc_2020
+data_filename: data_clinical_patient.txt
+genetic_alteration_type: CLINICAL
+datatype: PATIENT_ATTRIBUTES
diff --git a/public/brca_fuscc_2020/meta_clinical_sample.txt b/public/brca_fuscc_2020/meta_clinical_sample.txt
@@ -0,0 +1,4 @@
+cancer_study_identifier: brca_fuscc_2020
+data_filename: data_clinical_sample.txt
+genetic_alteration_type: CLINICAL
+datatype: SAMPLE_ATTRIBUTES
diff --git a/public/brca_fuscc_2020/meta_mutations.txt b/public/brca_fuscc_2020/meta_mutations.txt
@@ -0,0 +1,8 @@
+cancer_study_identifier: brca_fuscc_2020
+data_filename: data_mutations.txt
+stable_id: mutations
+genetic_alteration_type: MUTATION_EXTENDED
+datatype: MAF
+show_profile_in_analysis_tab: TRUE
+profile_name: Mutations
+profile_description: Mutation data from targeted sequencing.
diff --git a/public/brca_fuscc_2020/meta_study.txt b/public/brca_fuscc_2020/meta_study.txt
@@ -0,0 +1,7 @@
+cancer_study_identifier: brca_fuscc_2020
+type_of_cancer: brca
+name: Triple-Negative Breast Cancer (FUSCC, Cell Research 2020)
+description: Targeted sequencing of 69 refractory metastatic triple-negative breast cancer patients and their matched normal samples as part of the FUTURE trial.
+reference_genome: hg19
+pmid: 32719455
+citation: Jiang, Yi-Zhou et al. Cell Research 2020
diff --git a/public/cscc_ranson_2022/case_lists/cases_all.txt b/public/cscc_ranson_2022/case_lists/cases_all.txt
@@ -0,0 +1,6 @@
+cancer_study_identifier: cscc_ranson_2022
+stable_id: cscc_ranson_2022_all
+case_list_category: all_cases_in_study
+case_list_name: All Tumors
+case_list_description: All tumor samples
+case_list_ids: CSCC_0001-M1	CSCC_0002-M1	CSCC_0003-M1	CSCC_0004-M1	CSCC_0005-M1	CSCC_0006-M1	CSCC_0007-M1	CSCC_0009-M1	CSCC_0010-M1	CSCC_0011-M1	CSCC_0012-M1	CSCC_0013-M1	CSCC_0014-M1	CSCC_0022-M1	CSCC_0024-M1	CSCC_0025-M1	CSCC_0066-M1	CSCC_0124-M1	CSCC_0125-M1	CSCC_0126-M1	CSCC_0130-M1	CSCC_0132-M1	CSCC_0133-M1	CSCC_0134-M1	CSCC_0135-M1
diff --git a/public/cscc_ranson_2022/case_lists/cases_sequenced.txt b/public/cscc_ranson_2022/case_lists/cases_sequenced.txt
@@ -0,0 +1,6 @@
+cancer_study_identifier: cscc_ranson_2022
+stable_id: cscc_ranson_2022_sequenced
+case_list_category: all_cases_with_mutation_data
+case_list_name: Sequenced Tumors
+case_list_description: All sequenced tumors
+case_list_ids: CSCC_0001-M1	CSCC_0002-M1	CSCC_0003-M1	CSCC_0004-M1	CSCC_0005-M1	CSCC_0006-M1	CSCC_0007-M1	CSCC_0009-M1	CSCC_0010-M1	CSCC_0011-M1	CSCC_0012-M1	CSCC_0013-M1	CSCC_0014-M1	CSCC_0022-M1	CSCC_0024-M1	CSCC_0025-M1	CSCC_0066-M1	CSCC_0124-M1	CSCC_0125-M1	CSCC_0126-M1	CSCC_0130-M1	CSCC_0132-M1	CSCC_0133-M1	CSCC_0134-M1	CSCC_0135-M1
diff --git a/public/cscc_ranson_2022/data_clinical_patient.txt b/public/cscc_ranson_2022/data_clinical_patient.txt
diff --git a/public/cscc_ranson_2022/data_clinical_sample.txt b/public/cscc_ranson_2022/data_clinical_sample.txt
diff --git a/public/cscc_ranson_2022/data_mutations.txt b/public/cscc_ranson_2022/data_mutations.txt
diff --git a/public/cscc_ranson_2022/meta_clinical_patient.txt b/public/cscc_ranson_2022/meta_clinical_patient.txt
@@ -0,0 +1,4 @@
+cancer_study_identifier: cscc_ranson_2022
+genetic_alteration_type: CLINICAL
+datatype: PATIENT_ATTRIBUTES
+data_filename: data_clinical_patient.txt
diff --git a/public/cscc_ranson_2022/meta_clinical_sample.txt b/public/cscc_ranson_2022/meta_clinical_sample.txt
@@ -0,0 +1,4 @@
+cancer_study_identifier: cscc_ranson_2022
+genetic_alteration_type: CLINICAL
+datatype: SAMPLE_ATTRIBUTES
+data_filename: data_clinical_sample.txt
diff --git a/public/cscc_ranson_2022/meta_mutations.txt b/public/cscc_ranson_2022/meta_mutations.txt
@@ -0,0 +1,8 @@
+cancer_study_identifier: cscc_ranson_2022
+stable_id: mutations
+profile_name: Mutations
+profile_description: Somatic mutations from WGS samples.
+genetic_alteration_type: MUTATION_EXTENDED
+datatype: MAF
+show_profile_in_analysis_tab: true
+data_filename: data_mutations.txt
diff --git a/public/cscc_ranson_2022/meta_study.txt b/public/cscc_ranson_2022/meta_study.txt
@@ -0,0 +1,8 @@
+type_of_cancer: cscc
+cancer_study_identifier: cscc_ranson_2022
+name: Cutaneous Squamous Cell Carcinoma (UOW, Front Oncol 2022)
+description: Whole genome sequencing of 25 metastatic cutaneous squamous cell carcinoma and their matched normals. Generated by the Ranson Lab 2022.
+citation: Thind, Amarinder Singh et al. Front Oncol 2022
+reference_genome: hg38
+pmid: 35982973
+groups: PUBLIC
diff --git a/public/gist_msk_2023/data_clinical_patient.txt b/public/gist_msk_2023/data_clinical_patient.txt
diff --git a/public/gist_msk_2023/data_clinical_sample.txt b/public/gist_msk_2023/data_clinical_sample.txt
diff --git a/public/gist_msk_2023/data_cna.txt b/public/gist_msk_2023/data_cna.txt
diff --git a/public/gist_msk_2023/data_mutations.txt b/public/gist_msk_2023/data_mutations.txt
diff --git a/public/gist_msk_2023/data_sv.txt b/public/gist_msk_2023/data_sv.txt
diff --git a/public/gist_msk_2023/meta_study.txt b/public/gist_msk_2023/meta_study.txt
@@ -3,4 +3,4 @@ type_of_cancer: gist
 name: Gastrointestinal Stromal Tumors (MSK, Clin Cancer Res 2023)
 description:  Targeted sequencing of 469 gastrointestinal stromal tumors and their matched normals via MSK-IMPACT.
 pmid: 37477937
-citation: Dermawan et al. Clin Cancer Res 2023
+citation: Dermawan et al. Clin Cancer Res 2023
diff --git a/public/hcc_clca_2024/README.md b/public/hcc_clca_2024/README.md
@@ -0,0 +1,33 @@
+# Curation and transformation of CLCA Dataset:
+
+## General Information
+- Data Source: [CLCA data](http://lifeome.net:8080/clca/#/)
+- Reference publication: [PubMed Reference](https://pubmed.ncbi.nlm.nih.gov/38355797/)
+- Whole Genome Sequencing of 494 Hepatocelluar Carcinoma Cases.
+- Reference genome used: GRCh37
+
+## Clinical Data
+- Data Source: (http://lifeome.net:8080/clca/#/cases/)
+- Patient data and sample data was retrieved from Supplementary Table 1 - (41586_2024_7054_MOESM3_ESM.xlsx).
+
+## Mutational Data
+- Mutation data was retrieved from (http://lifeome.net:8080/clca/#/mutations)
+- Mutation data was edited into MAF format and annotated using the [Genome Nexus Annotation Pipeline](https://github.com/genome-nexus/genome-nexus-annotation-pipeline)
+
+## Case Lists
+Case lists generated:
+- cases_all
+- cases_sequenced
+
+## RNA Seq TPM Data
+- RNA Sequencing TPM data was retrieved from Supplementary Table 2 (41586_2024_7054_MOESM4_ESM.xlsx)
+- Z-Scores has been calculated.
+
+# Meta Study
+- Whole genome sequencing of 494 chinese Hepatocellular carcinomas and their matched normals. 
+- cancer_study_identifier: hcc_clca_2024
+- name: Hepatocellular Carcinoma (CLCA, Nature 2024)
+
+To do:
+
+- Waiting for SV data and CNA data as they are not in cbioportal format.
diff --git a/public/hcc_clca_2024/case_lists/cases_all.txt b/public/hcc_clca_2024/case_lists/cases_all.txt
@@ -0,0 +1,6 @@
+cancer_study_identifier: hcc_clca_2024
+stable_id: hcc_clca_2024_all
+case_list_name: All samples
+case_list_description: All samples (494 samples)
+case_list_category: all_cases_in_study
+case_list_ids: CLCA_0100	CLCA_0209	CLCA_0208	CLCA_0101	CLCA_0203	CLCA_0202	CLCA_0201	CLCA_0200	CLCA_0207	CLCA_0206	CLCA_0205	CLCA_0204	CLCA_0159	CLCA_0261	CLCA_0158	CLCA_0109	CLCA_0056	CLCA_0057	CLCA_0054	CLCA_0055	CLCA_0052	CLCA_0053	CLCA_0050	CLCA_0051	CLCA_0117	CLCA_0116	CLCA_0115	CLCA_0114	CLCA_0113	CLCA_0112	CLCA_0058	CLCA_0059	CLCA_0150	CLCA_0399	CLCA_0251	CLCA_0373	CLCA_0372	CLCA_0371	CLCA_0370	CLCA_0377	CLCA_0376	CLCA_0375	CLCA_0374	CLCA_0470	CLCA_0471	CLCA_0379	CLCA_0378	CLCA_0474	CLCA_0475	CLCA_0476	CLCA_0477	CLCA_0485	CLCA_0484	CLCA_0487	CLCA_0486	CLCA_0481	CLCA_0480	CLCA_0483	CLCA_0482	CLCA_0489	CLCA_0488	CLCA_0092	CLCA_0093	CLCA_0090	CLCA_0091	CLCA_0096	CLCA_0097	CLCA_0094	CLCA_0095	CLCA_0153	CLCA_0152	CLCA_0098	CLCA_0099	CLCA_0157	CLCA_0156	CLCA_0155	CLCA_0154	CLCA_0250	CLCA_0398	CLCA_0252	CLCA_0253	CLCA_0254	CLCA_0255	CLCA_0256	CLCA_0257	CLCA_0391	CLCA_0390	CLCA_0393	CLCA_0392	CLCA_0395	CLCA_0394	CLCA_0397	CLCA_0396	CLCA_0029	CLCA_0028	CLCA_0027	CLCA_0026	CLCA_0025	CLCA_0024	CLCA_0023	CLCA_0022	CLCA_0021	CLCA_0020	CLCA_0434	CLCA_0435	CLCA_0436	CLCA_0437	CLCA_0430	CLCA_0431	CLCA_0432	CLCA_0433	CLCA_0438	CLCA_0439	CLCA_0290	CLCA_0291	CLCA_0328	CLCA_0282	CLCA_0281	CLCA_0280	CLCA_0287	CLCA_0286	CLCA_0285	CLCA_0284	CLCA_0320	CLCA_0321	CLCA_0289	CLCA_0288	CLCA_0324	CLCA_0325	CLCA_0326	CLCA_0327	CLCA_0441	CLCA_0440	CLCA_0443	CLCA_0442	CLCA_0445	CLCA_0444	CLCA_0447	CLCA_0446	CLCA_0449	CLCA_0298	CLCA_0299	CLCA_0453	CLCA_0197	CLCA_0196	CLCA_0195	CLCA_0194	CLCA_0218	CLCA_0219	CLCA_0191	CLCA_0190	CLCA_0214	CLCA_0215	CLCA_0216	CLCA_0217	CLCA_0210	CLCA_0211	CLCA_0199	CLCA_0198	CLCA_0409	CLCA_0361	CLCA_0069	CLCA_0068	CLCA_0063	CLCA_0062	CLCA_0061	CLCA_0060	CLCA_0067	CLCA_0066	CLCA_0065	CLCA_0064	CLCA_0269	CLCA_0268	CLCA_0102	CLCA_0103	CLCA_0104	CLCA_0105	CLCA_0106	CLCA_0107	CLCA_0108	CLCA_0260	CLCA_0263	CLCA_0262	CLCA_0265	CLCA_0264	CLCA_0267	CLCA_0266	CLCA_0119	CLCA_0118	CLCA_0111	CLCA_0110	CLCA_0364	CLCA_0365	CLCA_0366	CLCA_0367	CLCA_0360	CLCA_0408	CLCA_0362	CLCA_0363	CLCA_0405	CLCA_0404	CLCA_0407	CLCA_0406	CLCA_0368	CLCA_0369	CLCA_0403	CLCA_0402	CLCA_0160	CLCA_0161	CLCA_0311	CLCA_0310	CLCA_0313	CLCA_0312	CLCA_0315	CLCA_0314	CLCA_0317	CLCA_0316	CLCA_0319	CLCA_0318	CLCA_0494	CLCA_0492	CLCA_0493	CLCA_0490	CLCA_0491	CLCA_0169	CLCA_0148	CLCA_0149	CLCA_0144	CLCA_0145	CLCA_0146	CLCA_0147	CLCA_0140	CLCA_0141	CLCA_0142	CLCA_0143	CLCA_0225	CLCA_0224	CLCA_0227	CLCA_0226	CLCA_0221	CLCA_0220	CLCA_0223	CLCA_0222	CLCA_0382	CLCA_0383	CLCA_0380	CLCA_0381	CLCA_0229	CLCA_0228	CLCA_0384	CLCA_0385	CLCA_0258	CLCA_0139	CLCA_0138	CLCA_0032	CLCA_0033	CLCA_0034	CLCA_0035	CLCA_0036	CLCA_0037	CLCA_0131	CLCA_0130	CLCA_0133	CLCA_0132	CLCA_0135	CLCA_0134	CLCA_0137	CLCA_0259	CLCA_0294	CLCA_0295	CLCA_0296	CLCA_0297	CLCA_0359	CLCA_0358	CLCA_0292	CLCA_0293	CLCA_0355	CLCA_0354	CLCA_0357	CLCA_0356	CLCA_0351	CLCA_0350	CLCA_0353	CLCA_0352	CLCA_0452	CLCA_0283	CLCA_0450	CLCA_0451	CLCA_0456	CLCA_0457	CLCA_0454	CLCA_0329	CLCA_0458	CLCA_0459	CLCA_0188	CLCA_0189	CLCA_0180	CLCA_0181	CLCA_0182	CLCA_0183	CLCA_0184	CLCA_0185	CLCA_0186	CLCA_0187	CLCA_0323	CLCA_0478	CLCA_0078	CLCA_0079	CLCA_0479	CLCA_0074	CLCA_0075	CLCA_0076	CLCA_0077	CLCA_0070	CLCA_0071	CLCA_0072	CLCA_0073	CLCA_0175	CLCA_0174	CLCA_0278	CLCA_0176	CLCA_0171	CLCA_0170	CLCA_0173	CLCA_0448	CLCA_0272	CLCA_0273	CLCA_0270	CLCA_0271	CLCA_0179	CLCA_0277	CLCA_0274	CLCA_0275	CLCA_0472	CLCA_0473	CLCA_0401	CLCA_0047	CLCA_0009	CLCA_0008	CLCA_0129	CLCA_0001	CLCA_0003	CLCA_0002	CLCA_0005	CLCA_0004	CLCA_0007	CLCA_0006	CLCA_0400	CLCA_0418	CLCA_0419	CLCA_0416	CLCA_0417	CLCA_0414	CLCA_0415	CLCA_0412	CLCA_0413	CLCA_0410	CLCA_0411	CLCA_0049	CLCA_0151	CLCA_0048	CLCA_0302	CLCA_0303	CLCA_0300	CLCA_0301	CLCA_0306	CLCA_0307	CLCA_0304	CLCA_0305	CLCA_0308	CLCA_0309	CLCA_0177	CLCA_0279	CLCA_0455	CLCA_0172	CLCA_0276	CLCA_0178	CLCA_0236	CLCA_0237	CLCA_0234	CLCA_0235	CLCA_0232	CLCA_0233	CLCA_0230	CLCA_0231	CLCA_0238	CLCA_0239	CLCA_0322	CLCA_0388	CLCA_0045	CLCA_0044	CLCA_0128	CLCA_0389	CLCA_0041	CLCA_0040	CLCA_0043	CLCA_0042	CLCA_0122	CLCA_0123	CLCA_0120	CLCA_0121	CLCA_0126	CLCA_0127	CLCA_0124	CLCA_0125	CLCA_0193	CLCA_0192	CLCA_0386	CLCA_0387	CLCA_0046	CLCA_0212	CLCA_0348	CLCA_0349	CLCA_0346	CLCA_0347	CLCA_0344	CLCA_0213	CLCA_0342	CLCA_0343	CLCA_0340	CLCA_0341	CLCA_0467	CLCA_0466	CLCA_0465	CLCA_0464	CLCA_0463	CLCA_0462	CLCA_0461	CLCA_0460	CLCA_0469	CLCA_0468	CLCA_0241	CLCA_0081	CLCA_0080	CLCA_0083	CLCA_0082	CLCA_0085	CLCA_0084	CLCA_0087	CLCA_0086	CLCA_0089	CLCA_0088	CLCA_0166	CLCA_0167	CLCA_0164	CLCA_0165	CLCA_0162	CLCA_0163	CLCA_0249	CLCA_0248	CLCA_0247	CLCA_0246	CLCA_0245	CLCA_0244	CLCA_0243	CLCA_0242	CLCA_0168	CLCA_0240	CLCA_0018	CLCA_0019	CLCA_0012	CLCA_0013	CLCA_0010	CLCA_0011	CLCA_0016	CLCA_0017	CLCA_0014	CLCA_0015	CLCA_0423	CLCA_0422	CLCA_0421	CLCA_0420	CLCA_0427	CLCA_0426	CLCA_0425	CLCA_0424	CLCA_0429	CLCA_0428	CLCA_0030	CLCA_0345	CLCA_0031	CLCA_0038	CLCA_0039	CLCA_0337	CLCA_0336	CLCA_0335	CLCA_0334	CLCA_0333	CLCA_0332	CLCA_0331	CLCA_0330	CLCA_0339	CLCA_0338	CLCA_0136
diff --git a/public/hcc_clca_2024/case_lists/cases_mrna_seq_tpm.txt b/public/hcc_clca_2024/case_lists/cases_mrna_seq_tpm.txt
@@ -0,0 +1,6 @@
+cancer_study_identifier: hcc_clca_2024
+stable_id: hcc_clca_2024_tpm
+case_list_name: Samples with mRNA data (RNA Seq TPM)
+case_list_description: Samples with mRNA expression data (239 samples)
+case_list_category: all_cases_with_mrna_rnaseq_data
+case_list_ids: CLCA_0001	CLCA_0002	CLCA_0009	CLCA_0012	CLCA_0017	CLCA_0073	CLCA_0075	CLCA_0080	CLCA_0082	CLCA_0083	CLCA_0084	CLCA_0085	CLCA_0089	CLCA_0092	CLCA_0093	CLCA_0095	CLCA_0096	CLCA_0106	CLCA_0109	CLCA_0112	CLCA_0115	CLCA_0118	CLCA_0122	CLCA_0123	CLCA_0124	CLCA_0125	CLCA_0126	CLCA_0128	CLCA_0130	CLCA_0131	CLCA_0134	CLCA_0137	CLCA_0138	CLCA_0139	CLCA_0141	CLCA_0142	CLCA_0147	CLCA_0149	CLCA_0150	CLCA_0152	CLCA_0153	CLCA_0154	CLCA_0155	CLCA_0157	CLCA_0162	CLCA_0178	CLCA_0180	CLCA_0181	CLCA_0182	CLCA_0183	CLCA_0184	CLCA_0187	CLCA_0188	CLCA_0193	CLCA_0194	CLCA_0195	CLCA_0196	CLCA_0198	CLCA_0199	CLCA_0200	CLCA_0202	CLCA_0203	CLCA_0205	CLCA_0206	CLCA_0207	CLCA_0208	CLCA_0209	CLCA_0210	CLCA_0211	CLCA_0212	CLCA_0214	CLCA_0216	CLCA_0218	CLCA_0219	CLCA_0220	CLCA_0222	CLCA_0223	CLCA_0224	CLCA_0225	CLCA_0227	CLCA_0228	CLCA_0229	CLCA_0230	CLCA_0231	CLCA_0232	CLCA_0233	CLCA_0234	CLCA_0236	CLCA_0237	CLCA_0238	CLCA_0239	CLCA_0240	CLCA_0242	CLCA_0244	CLCA_0246	CLCA_0249	CLCA_0250	CLCA_0252	CLCA_0255	CLCA_0263	CLCA_0265	CLCA_0279	CLCA_0285	CLCA_0287	CLCA_0289	CLCA_0292	CLCA_0296	CLCA_0298	CLCA_0299	CLCA_0300	CLCA_0305	CLCA_0306	CLCA_0307	CLCA_0308	CLCA_0309	CLCA_0310	CLCA_0311	CLCA_0312	CLCA_0313	CLCA_0314	CLCA_0316	CLCA_0317	CLCA_0319	CLCA_0320	CLCA_0321	CLCA_0322	CLCA_0323	CLCA_0324	CLCA_0325	CLCA_0326	CLCA_0327	CLCA_0328	CLCA_0329	CLCA_0330	CLCA_0331	CLCA_0332	CLCA_0333	CLCA_0335	CLCA_0336	CLCA_0338	CLCA_0339	CLCA_0340	CLCA_0341	CLCA_0346	CLCA_0347	CLCA_0350	CLCA_0354	CLCA_0355	CLCA_0356	CLCA_0359	CLCA_0362	CLCA_0363	CLCA_0364	CLCA_0367	CLCA_0368	CLCA_0369	CLCA_0371	CLCA_0374	CLCA_0375	CLCA_0376	CLCA_0377	CLCA_0378	CLCA_0379	CLCA_0380	CLCA_0381	CLCA_0384	CLCA_0387	CLCA_0388	CLCA_0389	CLCA_0390	CLCA_0392	CLCA_0395	CLCA_0396	CLCA_0397	CLCA_0399	CLCA_0401	CLCA_0402	CLCA_0404	CLCA_0406	CLCA_0407	CLCA_0410	CLCA_0413	CLCA_0414	CLCA_0417	CLCA_0418	CLCA_0423	CLCA_0424	CLCA_0425	CLCA_0426	CLCA_0427	CLCA_0428	CLCA_0430	CLCA_0433	CLCA_0434	CLCA_0436	CLCA_0437	CLCA_0438	CLCA_0439	CLCA_0440	CLCA_0442	CLCA_0443	CLCA_0444	CLCA_0445	CLCA_0446	CLCA_0447	CLCA_0448	CLCA_0450	CLCA_0452	CLCA_0453	CLCA_0455	CLCA_0456	CLCA_0458	CLCA_0460	CLCA_0462	CLCA_0463	CLCA_0468	CLCA_0469	CLCA_0470	CLCA_0474	CLCA_0475	CLCA_0476	CLCA_0477	CLCA_0478	CLCA_0479	CLCA_0480	CLCA_0481	CLCA_0482	CLCA_0483	CLCA_0484	CLCA_0485	CLCA_0486	CLCA_0487	CLCA_0488	CLCA_0489	CLCA_0490	CLCA_0491	CLCA_0492	CLCA_0493	CLCA_0494