fix: mkdocs (#26)

mkdocs.yml

@@ -0,0 +1,73 @@
+site_name: sr2silo
+theme:
+  name: material
+  features:
+    - navigation.tabs
+    - navigation.sections
+    - toc.integrate
+    - search.suggest
+    - search.highlight
+    - content.tabs.link
+    - content.code.annotation
+    - content.code.copy
+  language: en
+  palette:
+    - scheme: default
+      toggle:
+        icon: material/toggle-switch-off-outline
+        name: Switch to dark mode
+      primary: teal
+      accent: purple
+    - scheme: slate
+      toggle:
+        icon: material/toggle-switch
+        name: Switch to light mode
+      primary: teal
+      accent: lime
+
+repo_name: usefulgnom
+repo_url: https://github.com/cbg-ethz/sr2silo
+
+plugins:
+  - search
+  - mkdocstrings:
+      default_handler: python
+      handlers:
+        python:
+          options:
+            show_source: false
+            show_root_heading: true
+
+nav:
+  # - Home: index.md
+  # - Contributing: contributing.md
+  # - Tutorial: tutorial/index.md
+  # - API: api/index.md
+
+watch:
+  - src/sr2silo
+
+extra:
+  social:
+    - icon: fontawesome/brands/github-alt
+      link: https://github.com/cbg-ethz/sr2silo
+
+markdown_extensions:
+  - pymdownx.highlight:
+      anchor_linenums: true
+  - pymdownx.inlinehilite
+  - pymdownx.snippets
+  - admonition
+  - pymdownx.arithmatex:
+      generic: true
+  - footnotes
+  - pymdownx.details
+  - pymdownx.superfences
+  - pymdownx.mark
+  - attr_list
+
+
+extra_javascript:
+  - javascripts/mathjax.js
+  - https://polyfill.io/v3/polyfill.min.js?features=es6
+  - https://cdn.jsdelivr.net/npm/mathjax@3/es5/tex-mml-chtml.js