Merge pull request #93 from coganlab/plots-and-mats #144
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| name: 'Tests' | |
| on: | |
| push: | |
| branches: [ main ] | |
| pull_request: | |
| branches: [ main ] | |
| jobs: | |
| pytest: | |
| name: '${{ matrix.os }} / ${{ matrix.kind }} / ${{ matrix.python }}' | |
| timeout-minutes: 70 | |
| continue-on-error: true | |
| runs-on: ${{ matrix.os }} | |
| defaults: | |
| run: | |
| shell: bash -el {0} | |
| env: | |
| PYTHON_VERSION: '${{ matrix.python }}' | |
| MKL_NUM_THREADS: '1' | |
| OPENBLAS_NUM_THREADS: '1' | |
| PYTHONUNBUFFERED: '1' | |
| MNE_CI_KIND: '${{ matrix.kind }}' | |
| CI_OS_NAME: '${{ matrix.os }}' | |
| strategy: | |
| matrix: | |
| include: | |
| - os: windows-latest | |
| python: '3.10' | |
| kind: conda | |
| - os: ubuntu-latest | |
| python: '3.11' | |
| kind: pip | |
| - os: windows-latest | |
| python: '3.11' | |
| kind: mamba | |
| steps: | |
| - uses: actions/checkout@v4 | |
| # Xvfb/OpenGL | |
| - uses: pyvista/setup-headless-display-action@main | |
| with: | |
| qt: true | |
| pyvista: false | |
| # Python (if pip) | |
| - uses: actions/setup-python@v4 | |
| with: | |
| python-version: ${{ matrix.python }} | |
| - name: install pip requirements | |
| run: | | |
| python -m pip install --upgrade pip | |
| python -m pip install flake8 pytest tqdm pyqt5-tools | |
| if [ -f envs/requirements.txt ]; then pip install -r envs/requirements.txt; fi | |
| if: startswith(matrix.kind, 'pip') | |
| # Python (if conda) | |
| - uses: conda-incubator/setup-miniconda@v3 | |
| with: | |
| miniforge-variant: Mambaforge | |
| miniforge-version: latest | |
| activate-environment: test | |
| environment-file: envs/environment.yml | |
| python-version: ${{ matrix.python-version }} | |
| auto-activate-base: false | |
| use-mamba: ${{ matrix.kind != 'conda' }} | |
| if: ${{ !startswith(matrix.kind, 'pip') }} | |
| # Check Qt on non-notebook | |
| - run: ./.github/check_qt_import.sh $MNE_QT_BACKEND | |
| if: ${{ env.MNE_QT_BACKEND != '' }} | |
| - name: Test with pytest | |
| run: | | |
| pytest ieeg -v --cov=. --doctest-modules --pycodestyle --cov-report xml | |
| - name: Upload coverage reports to Codecov | |
| uses: codecov/codecov-action@v3 | |
| if: matrix.kind == 'mamba' |