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connor-lab

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  1. ncov2019-artic-nf ncov2019-artic-nf Public

    A Nextflow pipeline for running the ARTIC network's fieldbioinformatics tools (https://github.com/artic-network/fieldbioinformatics), with a focus on ncov2019

    Nextflow 89 88

  2. aln2type aln2type Public

    Python 8 3

  3. vapor vapor Public

    Python 6 9

  4. singularity-recipes singularity-recipes Public

    A collection of Singularity recipes useful for our nextflow pipelines

    Perl 5 1

  5. nextflow_pipelines nextflow_pipelines Public

    Nextflow pipeline script, config and ancillary files for PHW PenGU sequencing

    Nextflow 3 2

  6. qc_nextflow qc_nextflow Public

    A nextflow pipeline for inital QC of Illumina sequencing data

    Nextflow 3 1

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