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Lots more FlatGFA Python business #177

Merged
merged 8 commits into from
May 12, 2024
Merged

Lots more FlatGFA Python business #177

merged 8 commits into from
May 12, 2024

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sampsyo
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@sampsyo sampsyo commented May 12, 2024

Some new features in the Python FlatGFA bindings:

  • expose path steps via for step in path: ...
  • expose links
  • look up paths and segments by name with g.paths.find() and g.segments.find()
  • str(g) gives you a GFA string
  • write GFAs to files with g.write_gfa() and g.write_flatgfa()

Getting kinda close to feature-complete for an MVP.

@sampsyo sampsyo merged commit 87a7e40 into main May 12, 2024
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@sampsyo sampsyo deleted the even-more-flatgfa-py branch May 12, 2024 23:43
sampsyo added a commit that referenced this pull request Dec 29, 2024
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