ci/testing

.github/workflows/docker-publish.yml

@@ -1,9 +1,9 @@
 name: flaiR-Docker
 on:
   push:
-    branches: [main, master]
+    branches: [main, master, develop]
   pull_request:
-    branches: [main, master]
+    branches: [main, master, develop]
 
 
 jobs:

.github/workflows/r-python-3-1.yml

@@ -0,0 +1,62 @@
+name: flaiR-Python-3.10
+
+on:
+  push:
+    branches:
+      - main
+      - develop
+  pull_request:
+    branches:
+      - main
+      - develop
+
+jobs:
+  R-CMD-check:
+    runs-on: ${{ matrix.config.os }}
+    name: ${{ matrix.config.os }} (${{ matrix.config.r }})
+    strategy:
+      fail-fast: false
+      matrix:
+        config:
+          - {os: macos-latest,   r: 'release'}
+          - {os: windows-latest, r: 'release'}
+          - {os: ubuntu-latest,   r: 'devel', http-user-agent: 'release'}
+          - {os: ubuntu-latest,   r: 'release'}
+
+    env:
+      GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
+      R_KEEP_PKG_SOURCE: yes
+
+    steps:
+      - uses: actions/checkout@v2
+
+      - uses: r-lib/actions/setup-r@v2
+        with:
+          r-version: ${{ matrix.config.r }}
+          http-user-agent: ${{ matrix.config.http-user-agent }}
+          use-public-rspm: true
+
+      - uses: r-lib/actions/setup-pandoc@v2
+
+      - name: Setup Python
+        uses: actions/setup-python@v2
+        with:
+          python-version: '3.10'
+
+      - name: Check Python Version
+        run: python --version
+
+      - name: Install Python dependencies
+        run: |
+          python -m pip install --upgrade pip
+          # pip install flair
+
+      - name: Install R dependencies
+        run: |
+          install.packages('remotes')
+          remotes::install_github("davidycliao/flaiR", force = TRUE)
+        shell: Rscript {0}
+
+      - uses: r-lib/actions/setup-r-dependencies@v2
+        with:
+          extra-packages: rcmdcheck

.github/workflows/r-python-3-11.yml

@@ -0,0 +1,62 @@
+name: flaiR-Python3.11
+
+on:
+  push:
+    branches:
+      - main
+      - develop
+  pull_request:
+    branches:
+      - main
+      - develop
+
+jobs:
+  R-CMD-check:
+    runs-on: ${{ matrix.config.os }}
+    name: ${{ matrix.config.os }} (${{ matrix.config.r }})
+    strategy:
+      fail-fast: false
+      matrix:
+        config:
+          - {os: macos-latest,   r: 'release'}
+          - {os: windows-latest, r: 'release'}
+          - {os: ubuntu-latest,   r: 'devel', http-user-agent: 'release'}
+          - {os: ubuntu-latest,   r: 'release'}
+
+    env:
+      GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
+      R_KEEP_PKG_SOURCE: yes
+
+    steps:
+      - uses: actions/checkout@v2
+
+      - uses: r-lib/actions/setup-r@v2
+        with:
+          r-version: ${{ matrix.config.r }}
+          http-user-agent: ${{ matrix.config.http-user-agent }}
+          use-public-rspm: true
+
+      - uses: r-lib/actions/setup-pandoc@v2
+
+      - name: Setup Python
+        uses: actions/setup-python@v2
+        with:
+          python-version: '3.11'
+
+      - name: Check Python Version
+        run: python --version
+
+      - name: Install Python dependencies
+        run: |
+          python -m pip install --upgrade pip
+          # pip install flair
+
+      - name: Install R dependencies
+        run: |
+          install.packages('remotes')
+          remotes::install_github("davidycliao/flaiR", force = TRUE)
+        shell: Rscript {0}
+
+      - uses: r-lib/actions/setup-r-dependencies@v2
+        with:
+          extra-packages: rcmdcheck

.github/workflows/r-python-3-12.yml

@@ -0,0 +1,61 @@
+name: flaiR-Python3.12
+
+on:
+  push:
+    branches:
+      - main
+      - develop
+  pull_request:
+    branches:
+      - main
+      - develop
+jobs:
+  R-CMD-check:
+    runs-on: ${{ matrix.config.os }}
+    name: ${{ matrix.config.os }} (${{ matrix.config.r }})
+    strategy:
+      fail-fast: false
+      matrix:
+        config:
+          - {os: macos-latest,   r: 'release'}
+          - {os: windows-latest, r: 'release'}
+          - {os: ubuntu-latest,   r: 'devel', http-user-agent: 'release'}
+          - {os: ubuntu-latest,   r: 'release'}
+
+    env:
+      GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
+      R_KEEP_PKG_SOURCE: yes
+
+    steps:
+      - uses: actions/checkout@v2
+
+      - uses: r-lib/actions/setup-r@v2
+        with:
+          r-version: ${{ matrix.config.r }}
+          http-user-agent: ${{ matrix.config.http-user-agent }}
+          use-public-rspm: true
+
+      - uses: r-lib/actions/setup-pandoc@v2
+
+      - name: Setup Python
+        uses: actions/setup-python@v2
+        with:
+          python-version: '3.12'
+
+      - name: Check Python Version
+        run: python --version
+
+      - name: Install Python dependencies
+        run: |
+          python -m pip install --upgrade pip
+          # pip install flair
+
+      - name: Install R dependencies
+        run: |
+          install.packages('remotes')
+          remotes::install_github("davidycliao/flaiR", force = TRUE)
+        shell: Rscript {0}
+
+      - uses: r-lib/actions/setup-r-dependencies@v2
+        with:
+          extra-packages: rcmdcheck

.github/workflows/R-CMD-check.yml → .github/workflows/r-python-3-9.yml

@@ -1,10 +1,14 @@
-name: flaiR-Installation-Check
+name: flaiR-Python3.9
 
 on:
   push:
-    branches: [main, master]
+    branches:
+      - main
+      - develop
   pull_request:
-    branches: [main, master]
+    branches:
+      - main
+      - develop
 
 jobs:
   R-CMD-check:
@@ -45,7 +49,7 @@ jobs:
       - name: Install Python dependencies
         run: |
           python -m pip install --upgrade pip
-          pip install flair
+          # pip install flair
 
       - name: Install R dependencies
         run: |
@@ -56,37 +60,3 @@ jobs:
       - uses: r-lib/actions/setup-r-dependencies@v2
         with:
           extra-packages: rcmdcheck
-
-      - name: Setup Python (Only on ubuntu-latest)
-        if: matrix.config.os == 'ubuntu-latest'
-        uses: actions/setup-python@v2
-        with:
-          python-version: '3.10.13'
-
-      - name: Install Python venv and dependencies (Only on ubuntu-latest)
-        if: matrix.config.os == 'ubuntu-latest'
-        run: |
-          sudo apt-get update
-          sudo apt-get install -y python3-venv
-          python -m venv ~/.venv
-          echo "RETICULATE_PYTHON=~/.venv/bin/python" >> $GITHUB_ENV
-          source ~/.venv/bin/activate
-          pip install scipy==1.12.0
-
-      - name: Install Pandoc (Only on Windows)
-        if: matrix.config.os == 'windows-latest'
-        run: choco install pandoc
-
-      - name: Install Python dependencies (Only on Windows)
-        if: matrix.config.os == 'windows-latest'
-        run: |
-          python -m pip install --upgrade pip
-          pip install scipy==1.12.0
-          pip install flair
-
-      - name: Install Python dependencies (Only on macOS)
-        if: matrix.config.os == 'macos-latest'
-        run: |
-          python -m pip install --upgrade pip
-          pip install scipy==1.12.0
-          pip install flair

.github/workflows/r.yml

@@ -1,18 +1,14 @@
-# This workflow uses actions that are not certified by GitHub.
-# They are provided by a third-party and are governed by
-# separate terms of service, privacy policy, and support
-# documentation.
-#
-# See https://github.com/r-lib/actions/tree/master/examples#readme for
-# additional example workflows available for the R community.
-
 name: R-CMD-check
 
 on:
- push:
-   branches: [main, master]
- pull_request:
-   branches: [main, master]
+  push:
+    branches:
+      - main
+      - develop
+  pull_request:
+    branches:
+      - main
+      - develop
 
 jobs: