JD-2176 bumps to 2024

ebi-jdispatcher · Mar 20, 2024 · 88b9948 · 88b9948
1 parent f0decfe
commit 88b9948
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diff --git a/LICENSE b/LICENSE
@@ -186,7 +186,7 @@
       same "printed page" as the copyright notice for easier
       identification within third-party archives.
 
-   Copyright 2022 The European Bioinformatics Institute
+   Copyright 2024 The European Bioinformatics Institute
 
    Licensed under the Apache License, Version 2.0 (the "License");
    you may not use this file except in compliance with the License.

diff --git a/cwls-docker/clustalo.cwl b/cwls-docker/clustalo.cwl
@@ -1,6 +1,6 @@
 #!/usr/bin/env cwl-runner
 
-# Copyright (C) 2019 - 2021 EMBL - European Bioinformatics Institute
+# Copyright (C) 2019 - 2024 EMBL - European Bioinformatics Institute
 #
 # Licensed under the Apache License, Version 2.0 (the "License");
 # you may not use this file except in compliance with the License.

diff --git a/cwls-docker/dbfetch.cwl b/cwls-docker/dbfetch.cwl
@@ -1,6 +1,6 @@
 #!/usr/bin/env cwl-runner
 
-# Copyright (C) 2019 - 2021 EMBL - European Bioinformatics Institute
+# Copyright (C) 2019 - 2024 EMBL - European Bioinformatics Institute
 #
 # Licensed under the Apache License, Version 2.0 (the "License");
 # you may not use this file except in compliance with the License.

diff --git a/cwls-docker/emboss_backtranambig.cwl b/cwls-docker/emboss_backtranambig.cwl
@@ -1,6 +1,6 @@
 #!/usr/bin/env cwl-runner
 
-# Copyright (C) 2019 - 2021 EMBL - European Bioinformatics Institute
+# Copyright (C) 2019 - 2024 EMBL - European Bioinformatics Institute
 #
 # Licensed under the Apache License, Version 2.0 (the "License");
 # you may not use this file except in compliance with the License.

diff --git a/cwls-docker/emboss_backtranseq.cwl b/cwls-docker/emboss_backtranseq.cwl
@@ -1,6 +1,6 @@
 #!/usr/bin/env cwl-runner
 
-# Copyright (C) 2019 - 2021 EMBL - European Bioinformatics Institute
+# Copyright (C) 2019 - 2024 EMBL - European Bioinformatics Institute
 #
 # Licensed under the Apache License, Version 2.0 (the "License");
 # you may not use this file except in compliance with the License.

diff --git a/cwls-docker/emboss_cpgplot.cwl b/cwls-docker/emboss_cpgplot.cwl
@@ -1,6 +1,6 @@
 #!/usr/bin/env cwl-runner
 
-# Copyright (C) 2019 - 2021 EMBL - European Bioinformatics Institute
+# Copyright (C) 2019 - 2024 EMBL - European Bioinformatics Institute
 #
 # Licensed under the Apache License, Version 2.0 (the "License");
 # you may not use this file except in compliance with the License.

diff --git a/cwls-docker/emboss_dotmatcher.cwl b/cwls-docker/emboss_dotmatcher.cwl
@@ -1,6 +1,6 @@
 #!/usr/bin/env cwl-runner
 
-# Copyright (C) 2019 - 2021 EMBL - European Bioinformatics Institute
+# Copyright (C) 2019 - 2024 EMBL - European Bioinformatics Institute
 #
 # Licensed under the Apache License, Version 2.0 (the "License");
 # you may not use this file except in compliance with the License.

diff --git a/cwls-docker/emboss_dotpath.cwl b/cwls-docker/emboss_dotpath.cwl
@@ -1,6 +1,6 @@
 #!/usr/bin/env cwl-runner
 
-# Copyright (C) 2019 - 2021 EMBL - European Bioinformatics Institute
+# Copyright (C) 2019 - 2024 EMBL - European Bioinformatics Institute
 #
 # Licensed under the Apache License, Version 2.0 (the "License");
 # you may not use this file except in compliance with the License.

diff --git a/cwls-docker/emboss_dottup.cwl b/cwls-docker/emboss_dottup.cwl
@@ -1,6 +1,6 @@
 #!/usr/bin/env cwl-runner
 
-# Copyright (C) 2019 - 2021 EMBL - European Bioinformatics Institute
+# Copyright (C) 2019 - 2024 EMBL - European Bioinformatics Institute
 #
 # Licensed under the Apache License, Version 2.0 (the "License");
 # you may not use this file except in compliance with the License.

diff --git a/cwls-docker/emboss_isochore.cwl b/cwls-docker/emboss_isochore.cwl
@@ -1,6 +1,6 @@
 #!/usr/bin/env cwl-runner
 
-# Copyright (C) 2019 - 2021 EMBL - European Bioinformatics Institute
+# Copyright (C) 2019 - 2024 EMBL - European Bioinformatics Institute
 #
 # Licensed under the Apache License, Version 2.0 (the "License");
 # you may not use this file except in compliance with the License.

diff --git a/cwls-docker/emboss_matcher.cwl b/cwls-docker/emboss_matcher.cwl
@@ -1,6 +1,6 @@
 #!/usr/bin/env cwl-runner
 
-# Copyright (C) 2019 - 2021 EMBL - European Bioinformatics Institute
+# Copyright (C) 2019 - 2024 EMBL - European Bioinformatics Institute
 #
 # Licensed under the Apache License, Version 2.0 (the "License");
 # you may not use this file except in compliance with the License.

diff --git a/cwls-docker/emboss_needle.cwl b/cwls-docker/emboss_needle.cwl
@@ -1,6 +1,6 @@
 #!/usr/bin/env cwl-runner
 
-# Copyright (C) 2019 - 2021 EMBL - European Bioinformatics Institute
+# Copyright (C) 2019 - 2024 EMBL - European Bioinformatics Institute
 #
 # Licensed under the Apache License, Version 2.0 (the "License");
 # you may not use this file except in compliance with the License.

diff --git a/cwls-docker/emboss_newcpgreport.cwl b/cwls-docker/emboss_newcpgreport.cwl
@@ -1,6 +1,6 @@
 #!/usr/bin/env cwl-runner
 
-# Copyright (C) 2019 - 2021 EMBL - European Bioinformatics Institute
+# Copyright (C) 2019 - 2024 EMBL - European Bioinformatics Institute
 #
 # Licensed under the Apache License, Version 2.0 (the "License");
 # you may not use this file except in compliance with the License.

diff --git a/cwls-docker/emboss_pepinfo.cwl b/cwls-docker/emboss_pepinfo.cwl
@@ -1,6 +1,6 @@
 #!/usr/bin/env cwl-runner
 
-# Copyright (C) 2019 - 2021 EMBL - European Bioinformatics Institute
+# Copyright (C) 2019 - 2024 EMBL - European Bioinformatics Institute
 #
 # Licensed under the Apache License, Version 2.0 (the "License");
 # you may not use this file except in compliance with the License.

diff --git a/cwls-docker/emboss_pepstats.cwl b/cwls-docker/emboss_pepstats.cwl
@@ -1,6 +1,6 @@
 #!/usr/bin/env cwl-runner
 
-# Copyright (C) 2019 - 2021 EMBL - European Bioinformatics Institute
+# Copyright (C) 2019 - 2024 EMBL - European Bioinformatics Institute
 #
 # Licensed under the Apache License, Version 2.0 (the "License");
 # you may not use this file except in compliance with the License.

diff --git a/cwls-docker/emboss_pepwindow.cwl b/cwls-docker/emboss_pepwindow.cwl
@@ -1,6 +1,6 @@
 #!/usr/bin/env cwl-runner
 
-# Copyright (C) 2019 - 2021 EMBL - European Bioinformatics Institute
+# Copyright (C) 2019 - 2024 EMBL - European Bioinformatics Institute
 #
 # Licensed under the Apache License, Version 2.0 (the "License");
 # you may not use this file except in compliance with the License.

diff --git a/cwls-docker/emboss_polydot.cwl b/cwls-docker/emboss_polydot.cwl
@@ -1,6 +1,6 @@
 #!/usr/bin/env cwl-runner
 
-# Copyright (C) 2019 - 2021 EMBL - European Bioinformatics Institute
+# Copyright (C) 2019 - 2024 EMBL - European Bioinformatics Institute
 #
 # Licensed under the Apache License, Version 2.0 (the "License");
 # you may not use this file except in compliance with the License.

diff --git a/cwls-docker/emboss_seqret.cwl b/cwls-docker/emboss_seqret.cwl
@@ -1,6 +1,6 @@
 #!/usr/bin/env cwl-runner
 
-# Copyright (C) 2019 - 2021 EMBL - European Bioinformatics Institute
+# Copyright (C) 2019 - 2024 EMBL - European Bioinformatics Institute
 #
 # Licensed under the Apache License, Version 2.0 (the "License");
 # you may not use this file except in compliance with the License.

diff --git a/cwls-docker/emboss_sixpack.cwl b/cwls-docker/emboss_sixpack.cwl
@@ -1,6 +1,6 @@
 #!/usr/bin/env cwl-runner
 
-# Copyright (C) 2019 - 2021 EMBL - European Bioinformatics Institute
+# Copyright (C) 2019 - 2024 EMBL - European Bioinformatics Institute
 #
 # Licensed under the Apache License, Version 2.0 (the "License");
 # you may not use this file except in compliance with the License.

diff --git a/cwls-docker/emboss_stretcher.cwl b/cwls-docker/emboss_stretcher.cwl
@@ -1,6 +1,6 @@
 #!/usr/bin/env cwl-runner
 
-# Copyright (C) 2019 - 2021 EMBL - European Bioinformatics Institute
+# Copyright (C) 2019 - 2024 EMBL - European Bioinformatics Institute
 #
 # Licensed under the Apache License, Version 2.0 (the "License");
 # you may not use this file except in compliance with the License.

diff --git a/cwls-docker/emboss_transeq.cwl b/cwls-docker/emboss_transeq.cwl
@@ -1,6 +1,6 @@
 #!/usr/bin/env cwl-runner
 
-# Copyright (C) 2019 - 2021 EMBL - European Bioinformatics Institute
+# Copyright (C) 2019 - 2024 EMBL - European Bioinformatics Institute
 #
 # Licensed under the Apache License, Version 2.0 (the "License");
 # you may not use this file except in compliance with the License.

diff --git a/cwls-docker/emboss_water.cwl b/cwls-docker/emboss_water.cwl
@@ -1,6 +1,6 @@
 #!/usr/bin/env cwl-runner
 
-# Copyright (C) 2019 - 2021 EMBL - European Bioinformatics Institute
+# Copyright (C) 2019 - 2024 EMBL - European Bioinformatics Institute
 #
 # Licensed under the Apache License, Version 2.0 (the "License");
 # you may not use this file except in compliance with the License.

diff --git a/cwls-docker/fasta.cwl b/cwls-docker/fasta.cwl
@@ -1,6 +1,6 @@
 #!/usr/bin/env cwl-runner
 
-# Copyright (C) 2019 - 2021 EMBL - European Bioinformatics Institute
+# Copyright (C) 2019 - 2024 EMBL - European Bioinformatics Institute
 #
 # Licensed under the Apache License, Version 2.0 (the "License");
 # you may not use this file except in compliance with the License.

diff --git a/cwls-docker/fastm.cwl b/cwls-docker/fastm.cwl
@@ -1,6 +1,6 @@
 #!/usr/bin/env cwl-runner
 
-# Copyright (C) 2019 - 2021 EMBL - European Bioinformatics Institute
+# Copyright (C) 2019 - 2024 EMBL - European Bioinformatics Institute
 #
 # Licensed under the Apache License, Version 2.0 (the "License");
 # you may not use this file except in compliance with the License.

diff --git a/cwls-docker/genewise.cwl b/cwls-docker/genewise.cwl
@@ -1,6 +1,6 @@
 #!/usr/bin/env cwl-runner
 
-# Copyright (C) 2019 - 2021 EMBL - European Bioinformatics Institute
+# Copyright (C) 2019 - 2024 EMBL - European Bioinformatics Institute
 #
 # Licensed under the Apache License, Version 2.0 (the "License");
 # you may not use this file except in compliance with the License.

diff --git a/cwls-docker/hmmer3_hmmscan.cwl b/cwls-docker/hmmer3_hmmscan.cwl
@@ -1,6 +1,6 @@
 #!/usr/bin/env cwl-runner
 
-# Copyright (C) 2019 - 2021 EMBL - European Bioinformatics Institute
+# Copyright (C) 2019 - 2024 EMBL - European Bioinformatics Institute
 #
 # Licensed under the Apache License, Version 2.0 (the "License");
 # you may not use this file except in compliance with the License.

diff --git a/cwls-docker/hmmer3_phmmer.cwl b/cwls-docker/hmmer3_phmmer.cwl
@@ -1,6 +1,6 @@
 #!/usr/bin/env cwl-runner
 
-# Copyright (C) 2019 - 2021 EMBL - European Bioinformatics Institute
+# Copyright (C) 2019 - 2024 EMBL - European Bioinformatics Institute
 #
 # Licensed under the Apache License, Version 2.0 (the "License");
 # you may not use this file except in compliance with the License.

diff --git a/cwls-docker/infernal_cmscan.cwl b/cwls-docker/infernal_cmscan.cwl
@@ -1,6 +1,6 @@
 #!/usr/bin/env cwl-runner
 
-# Copyright (C) 2019 - 2021 EMBL - European Bioinformatics Institute
+# Copyright (C) 2019 - 2024 EMBL - European Bioinformatics Institute
 #
 # Licensed under the Apache License, Version 2.0 (the "License");
 # you may not use this file except in compliance with the License.

diff --git a/cwls-docker/iprscan5.cwl b/cwls-docker/iprscan5.cwl
@@ -1,6 +1,6 @@
 #!/usr/bin/env cwl-runner
 
-# Copyright (C) 2019 - 2021 EMBL - European Bioinformatics Institute
+# Copyright (C) 2019 - 2024 EMBL - European Bioinformatics Institute
 #
 # Licensed under the Apache License, Version 2.0 (the "License");
 # you may not use this file except in compliance with the License.

diff --git a/cwls-docker/kalign.cwl b/cwls-docker/kalign.cwl
@@ -1,6 +1,6 @@
 #!/usr/bin/env cwl-runner
 
-# Copyright (C) 2019 - 2021 EMBL - European Bioinformatics Institute
+# Copyright (C) 2019 - 2024 EMBL - European Bioinformatics Institute
 #
 # Licensed under the Apache License, Version 2.0 (the "License");
 # you may not use this file except in compliance with the License.

diff --git a/cwls-docker/lalign.cwl b/cwls-docker/lalign.cwl
@@ -1,6 +1,6 @@
 #!/usr/bin/env cwl-runner
 
-# Copyright (C) 2019 - 2021 EMBL - European Bioinformatics Institute
+# Copyright (C) 2019 - 2024 EMBL - European Bioinformatics Institute
 #
 # Licensed under the Apache License, Version 2.0 (the "License");
 # you may not use this file except in compliance with the License.

diff --git a/cwls-docker/mafft.cwl b/cwls-docker/mafft.cwl
@@ -1,6 +1,6 @@
 #!/usr/bin/env cwl-runner
 
-# Copyright (C) 2019 - 2021 EMBL - European Bioinformatics Institute
+# Copyright (C) 2019 - 2024 EMBL - European Bioinformatics Institute
 #
 # Licensed under the Apache License, Version 2.0 (the "License");
 # you may not use this file except in compliance with the License.

diff --git a/cwls-docker/mapmi.cwl b/cwls-docker/mapmi.cwl
@@ -1,6 +1,6 @@
 #!/usr/bin/env cwl-runner
 
-# Copyright (C) 2019 - 2021 EMBL - European Bioinformatics Institute
+# Copyright (C) 2019 - 2024 EMBL - European Bioinformatics Institute
 #
 # Licensed under the Apache License, Version 2.0 (the "License");
 # you may not use this file except in compliance with the License.

diff --git a/cwls-docker/muscle.cwl b/cwls-docker/muscle.cwl
@@ -1,6 +1,6 @@
 #!/usr/bin/env cwl-runner
 
-# Copyright (C) 2019 - 2021 EMBL - European Bioinformatics Institute
+# Copyright (C) 2019 - 2024 EMBL - European Bioinformatics Institute
 #
 # Licensed under the Apache License, Version 2.0 (the "License");
 # you may not use this file except in compliance with the License.

diff --git a/cwls-docker/mview.cwl b/cwls-docker/mview.cwl
@@ -1,6 +1,6 @@
 #!/usr/bin/env cwl-runner
 
-# Copyright (C) 2019 - 2021 EMBL - European Bioinformatics Institute
+# Copyright (C) 2019 - 2024 EMBL - European Bioinformatics Institute
 #
 # Licensed under the Apache License, Version 2.0 (the "License");
 # you may not use this file except in compliance with the License.

diff --git a/cwls-docker/ncbiblast.cwl b/cwls-docker/ncbiblast.cwl
@@ -1,6 +1,6 @@
 #!/usr/bin/env cwl-runner
 
-# Copyright (C) 2019 - 2021 EMBL - European Bioinformatics Institute
+# Copyright (C) 2019 - 2024 EMBL - European Bioinformatics Institute
 #
 # Licensed under the Apache License, Version 2.0 (the "License");
 # you may not use this file except in compliance with the License.

diff --git a/cwls-docker/pfamscan.cwl b/cwls-docker/pfamscan.cwl
@@ -1,6 +1,6 @@
 #!/usr/bin/env cwl-runner
 
-# Copyright (C) 2019 - 2021 EMBL - European Bioinformatics Institute
+# Copyright (C) 2019 - 2024 EMBL - European Bioinformatics Institute
 #
 # Licensed under the Apache License, Version 2.0 (the "License");
 # you may not use this file except in compliance with the License.

diff --git a/cwls-docker/phobius.cwl b/cwls-docker/phobius.cwl
@@ -1,6 +1,6 @@
 #!/usr/bin/env cwl-runner
 
-# Copyright (C) 2019 - 2021 EMBL - European Bioinformatics Institute
+# Copyright (C) 2019 - 2024 EMBL - European Bioinformatics Institute
 #
 # Licensed under the Apache License, Version 2.0 (the "License");
 # you may not use this file except in compliance with the License.

diff --git a/cwls-docker/prank.cwl b/cwls-docker/prank.cwl
@@ -1,6 +1,6 @@
 #!/usr/bin/env cwl-runner
 
-# Copyright (C) 2019 - 2021 EMBL - European Bioinformatics Institute
+# Copyright (C) 2019 - 2024 EMBL - European Bioinformatics Institute
 #
 # Licensed under the Apache License, Version 2.0 (the "License");
 # you may not use this file except in compliance with the License.

diff --git a/cwls-docker/pratt.cwl b/cwls-docker/pratt.cwl
@@ -1,6 +1,6 @@
 #!/usr/bin/env cwl-runner
 
-# Copyright (C) 2019 - 2021 EMBL - European Bioinformatics Institute
+# Copyright (C) 2019 - 2024 EMBL - European Bioinformatics Institute
 #
 # Licensed under the Apache License, Version 2.0 (the "License");
 # you may not use this file except in compliance with the License.

diff --git a/cwls-docker/promoterwise.cwl b/cwls-docker/promoterwise.cwl
@@ -1,6 +1,6 @@
 #!/usr/bin/env cwl-runner
 
-# Copyright (C) 2019 - 2021 EMBL - European Bioinformatics Institute
+# Copyright (C) 2019 - 2024 EMBL - European Bioinformatics Institute
 #
 # Licensed under the Apache License, Version 2.0 (the "License");
 # you may not use this file except in compliance with the License.

diff --git a/cwls-docker/psiblast.cwl b/cwls-docker/psiblast.cwl
@@ -1,6 +1,6 @@
 #!/usr/bin/env cwl-runner
 
-# Copyright (C) 2019 - 2021 EMBL - European Bioinformatics Institute
+# Copyright (C) 2019 - 2024 EMBL - European Bioinformatics Institute
 #
 # Licensed under the Apache License, Version 2.0 (the "License");
 # you may not use this file except in compliance with the License.

diff --git a/cwls-docker/psisearch.cwl b/cwls-docker/psisearch.cwl
@@ -1,6 +1,6 @@
 #!/usr/bin/env cwl-runner
 
-# Copyright (C) 2019 - 2021 EMBL - European Bioinformatics Institute
+# Copyright (C) 2019 - 2024 EMBL - European Bioinformatics Institute
 #
 # Licensed under the Apache License, Version 2.0 (the "License");
 # you may not use this file except in compliance with the License.

diff --git a/cwls-docker/psisearch2.cwl b/cwls-docker/psisearch2.cwl
@@ -1,6 +1,6 @@
 #!/usr/bin/env cwl-runner
 
-# Copyright (C) 2019 - 2021 EMBL - European Bioinformatics Institute
+# Copyright (C) 2019 - 2024 EMBL - European Bioinformatics Institute
 #
 # Licensed under the Apache License, Version 2.0 (the "License");
 # you may not use this file except in compliance with the License.

diff --git a/cwls-docker/radar.cwl b/cwls-docker/radar.cwl
@@ -1,6 +1,6 @@
 #!/usr/bin/env cwl-runner
 
-# Copyright (C) 2019 - 2021 EMBL - European Bioinformatics Institute
+# Copyright (C) 2019 - 2024 EMBL - European Bioinformatics Institute
 #
 # Licensed under the Apache License, Version 2.0 (the "License");
 # you may not use this file except in compliance with the License.

diff --git a/cwls-docker/saps.cwl b/cwls-docker/saps.cwl
@@ -1,6 +1,6 @@
 #!/usr/bin/env cwl-runner
 
-# Copyright (C) 2019 - 2021 EMBL - European Bioinformatics Institute
+# Copyright (C) 2019 - 2024 EMBL - European Bioinformatics Institute
 #
 # Licensed under the Apache License, Version 2.0 (the "License");
 # you may not use this file except in compliance with the License.

diff --git a/cwls-docker/seqcksum.cwl b/cwls-docker/seqcksum.cwl
@@ -1,6 +1,6 @@
 #!/usr/bin/env cwl-runner
 
-# Copyright (C) 2019 - 2021 EMBL - European Bioinformatics Institute
+# Copyright (C) 2019 - 2024 EMBL - European Bioinformatics Institute
 #
 # Licensed under the Apache License, Version 2.0 (the "License");
 # you may not use this file except in compliance with the License.

diff --git a/cwls-docker/simple_phylogeny.cwl b/cwls-docker/simple_phylogeny.cwl
@@ -1,6 +1,6 @@
 #!/usr/bin/env cwl-runner
 
-# Copyright (C) 2019 - 2021 EMBL - European Bioinformatics Institute
+# Copyright (C) 2019 - 2024 EMBL - European Bioinformatics Institute
 #
 # Licensed under the Apache License, Version 2.0 (the "License");
 # you may not use this file except in compliance with the License.

diff --git a/cwls-docker/tcoffee.cwl b/cwls-docker/tcoffee.cwl
@@ -1,6 +1,6 @@
 #!/usr/bin/env cwl-runner
 
-# Copyright (C) 2019 - 2021 EMBL - European Bioinformatics Institute
+# Copyright (C) 2019 - 2024 EMBL - European Bioinformatics Institute
 #
 # Licensed under the Apache License, Version 2.0 (the "License");
 # you may not use this file except in compliance with the License.