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wence- edited this page Oct 21, 2014
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Add the following to your .pbs
file to load the Firedrake environment:
module swap PrgEnv-cray PrgEnv-gnu
module swap python anaconda
module add firedrake
As the fdrake
user, start an interactive backend session:
qsub -IVl select=1,walltime=0:20:00 -A y07
and execute the following:
module load fdrake-build-env
cd $PETSC_DIR
make streams NPMAX=24 MPIEXEC=aprun
STREAM Triad numbers (compiled with gcc 4.9.1 cc -O2 -fPIC)
# nprocs MB/s
1 15218.5798
2 26044.8373
3 32489.4984
4 34929.4147
5 36030.9600
6 36560.5192
7 36858.5365
8 37011.9665
9 37076.0461
10 37128.6869
11 37185.4419
12 37259.8940
13 40288.8719
14 43310.2500
15 46454.4082
16 49586.8287
17 52627.4048
18 55711.5052
19 58812.1194
20 61829.0734
21 64976.4766
22 68109.9680
23 71058.1668
24 74103.9701
Problem:
pkg-config error:
Package sci_mpi_mp was not found in the pkg-config search path.
Solution:
export PKG_CONFIG_PATH=/opt/cray/libsci/12.2.0/GNU/48/sandybridge/lib/pkgconfig:$PKG_CONFIG_PATH
Building locally
Tips
- Running Firedrake tests with different subpackage branches
- Modifying and Rebuilding PETSc and petsc4py
- Vectorisation
- Debugging C kernels with
lldb
on MacOS - Parallel MPI Debugging with
tmux-mpi
,pdb
andgdb
- Parallel MPI Debugging with VSCode and
debugpy
- Modifying generated code
- Kernel profiling with LIKWID
- breakpoint() builtin not working
- Debugging pytest with multiple processing
Developers Notes
- Upcoming meeting 2024-08-21
- 2024-08-07
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