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Issues: franciscozorrilla/metaGEM

Job submission with qsub
#136 by fbartusch was closed Aug 18, 2023
Closed 2
documentation on running metaGEM using user-generated contig ...
#56 by zoey-rw was closed Nov 24, 2022
Closed 3
crossMapseries vs crossMapParallel
#60 by slambrechts was closed Jun 29, 2021
Closed 6
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13 Open 108 Closed
13 Open 108 Closed
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Issues list

[Question]: Creating a community model for 6-7 species using pre-binned MAGs obtained from elsewhere question Further information is requested
#169 opened Sep 27, 2024 by shikidj16
@franciscozorrilla
1
abundance | samtools view: failed to add PG line to the header question Further information is requested
#164 opened Jul 1, 2024 by kunaljaani
@franciscozorrilla
2
How to set media to interpret and compare the metabolic interactions at different habitats? question Further information is requested
#163 opened Jun 29, 2024 by CODRbio
@franciscozorrilla
5
Implementation of EukRep in the Snakemake pipeline question Further information is requested
#162 opened Jun 18, 2024 by Rachita-Kumar
@franciscozorrilla
4
maintenance: check bonus tool implementation in Snakefile and wrapper
#160 opened Mar 20, 2024 by franciscozorrilla
@franciscozorrilla
[Bug]: Metawrap Installation failure bug Something isn't working
#154 opened Jan 16, 2024 by Amit-H
@franciscozorrilla
5
improvement: use wc to count bp instead of summing contig header info for abundance enhancement New feature or request
#124 opened Apr 12, 2023 by franciscozorrilla
@franciscozorrilla
1
feature: test & enable bioconda installation on macbook enhancement New feature or request
#123 opened Apr 3, 2023 by franciscozorrilla
@franciscozorrilla
1
feature: add dead-end counter for assembly evaluation enhancement New feature or request
#121 opened Feb 28, 2023 by franciscozorrilla
@franciscozorrilla
feature: profile DNA damage to determine ancient or modern provenance enhancement New feature or request
#119 opened Jan 7, 2023 by franciscozorrilla
@franciscozorrilla
1
Error in running metaGEM.sh maintenance Chores & tasks required for smooth operations
#107 opened Aug 24, 2022 by Poccia
@franciscozorrilla
feature: test and compare new binners method Novel or alternative conceptual method
#76 opened Aug 19, 2021 by franciscozorrilla
@franciscozorrilla
4
Update needed to modelVis rule for models reconstructed using CarveMe version>=1.5.0 bug Something isn't working
#52 opened Jun 5, 2021 by shreyanshumale
@franciscozorrilla
1
ProTip! Find all open issues with in progress development work with linked:pr.