feat: lint tests directory (#163)

fulcrumgenomics · Jul 18, 2024 · d384daa · d384daa
1 parent dfcb7e2
commit d384daa
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Showing 2 changed files with 8 additions and 9 deletions.
diff --git a/.github/workflows/pythonpackage.yml b/.github/workflows/pythonpackage.yml
@@ -62,17 +62,17 @@ jobs:
     - name: Style checking
       shell: bash
       run: |
-        poetry run ruff format --check fgpyo
+        poetry run ruff format --check fgpyo tests
 
     - name: Run lint
       shell: bash
       run: |
-        poetry run ruff check fgpyo
+        poetry run ruff check fgpyo tests
 
     - name: Run mypy
       shell: bash
       run: |
-        poetry run mypy -p fgpyo --config=ci/mypy.ini
+        poetry run mypy fgpyo tests --config=ci/mypy.ini
 
     - name: Run pytest
       shell: bash

diff --git a/ci/check.sh b/ci/check.sh
@@ -1,4 +1,4 @@
-#!/bin/bash
+#!/usr/bin/env bash
 
 function banner() {
     echo
@@ -37,12 +37,11 @@ function run() {
 
 parent=$(cd $(dirname $0) && pwd -P)
 
-banner "Executing in conda environment ${CONDA_DEFAULT_ENV} in directory fgpyo"
-run "Style Checking" "ruff format fgpyo"
-run "Linting"        "ruff check --fix fgpyo"
-run "Type Checking"  "mypy -p fgpyo --config $parent/mypy.ini"
+run "Style Checking" "ruff format fgpyo tests"
+run "Linting"        "ruff check --fix fgpyo tests"
+run "Type Checking"  "mypy fgpyo tests --config $parent/mypy.ini"
 run "Unit Tests"     "python -m pytest -vv -r sx tests"
-run "Make docs"      "poetry run mkdocs build --strict"
+run "Make docs"      "mkdocs build --strict"
 
 if [ -z "$failures" ]; then
     banner "Checks Passed"