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Release 0.0.1
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@nh13 nh13 released this 24 Nov 16:47
· 139 commits to main since this release
0.0.1
9e78e1b

This is the first release of fgpyo version 0.0.1.

Modules included are:

  • fgpyo.sam.SupplementaryAlignment: stores a supplementary alignment record produced by BWA and stored in the SA SAM tag
  • fgypo.sam.Metric: a class for all metric-like tab-delimited files. Metric files are tab-delimited, contain a header, and zero or more rows for metric values. This makes it easy for them to be read in languages like R. This allows implementing classes to extend attr classes, have attributes be typed, and read and write to tab-delimited files with types properly preserved. This is inspired from the Metric in the fgbio-scala repository.
  • ancillary methods to support inspecting and maintaining types in fgypo.sam.Metric
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