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Add Reacto ontology build to pipeline and products #158

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kltm opened this issue Jan 29, 2020 · 1 comment
Closed

Add Reacto ontology build to pipeline and products #158

kltm opened this issue Jan 29, 2020 · 1 comment
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enhancement

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@kltm
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kltm commented Jan 29, 2020

Add build for reactome ontology to main pipeline.

See:
geneontology/pathways2GO#71
geneontology/pathways2GO#68

For some reason, unable to add appropriate project, so adding it to pipeline instead.
kltm added a commit that referenced this issue Jan 29, 2020
@kltm
frame for #158
7b26df7
kltm added a commit that referenced this issue Jan 29, 2020
@kltm
attempt at full command; work on #158
ab123a6
kltm added a commit that referenced this issue Jan 29, 2020
@kltm
whoops; work on #158
aef1b4a
kltm added a commit that referenced this issue Jan 29, 2020
@kltm
whoops; work on #158
4a1039c
kltm added a commit that referenced this issue Jan 29, 2020
@kltm
faster cycle; work on #158
a68976a
kltm added a commit that referenced this issue Jan 29, 2020
@kltm
unzip; work on #158
bf9eda4
kltm added a commit that referenced this issue Jan 29, 2020
@kltm
another pass; work on #158
f2759db
kltm added a commit that referenced this issue Jan 29, 2020
@kltm
force clobber; work on #158
0536c8d
kltm added a commit that referenced this issue Jan 29, 2020
@kltm
follow links; work on #158
be4ca67
kltm added a commit that referenced this issue Jan 29, 2020
@kltm
drop path; work on #158
4a6a4d7
kltm added a commit that referenced this issue Jan 29, 2020
@kltm
names are hard; work on #158
42222dd
kltm added a commit that referenced this issue Jan 29, 2020
@kltm
more complete example; work on #158
8a5de81
kltm added a commit that referenced this issue Jan 29, 2020
@kltm
final ontology path; work on #158
e88d2d4
kltm added a commit that referenced this issue Feb 7, 2020
@kltm
try to roll into ontology; work on #158
998ac9c
kltm added a commit that referenced this issue Feb 7, 2020
@kltm
try #158 draft in master
09ad9f4
kltm added a commit that referenced this issue Feb 7, 2020
@kltm
try #158 draft in snapshot
fa80b12
kltm added a commit that referenced this issue Feb 7, 2020
@kltm
try #158 draft in release
f7c9878
@kltm
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kltm commented Feb 13, 2020

Looking good. Closing for now; reopen if issue.

@kltm kltm closed this as completed Feb 13, 2020
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