Skip to content

Issues: ggloor/ALDEx_bioc

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

17 Open 35 Closed
17 Open 35 Closed
Author
Filter by author
Loading
Label
Filter by label
Loading
Use alt + click/return to exclude labels
or ⇧ + click/return for logical OR
Projects
Filter by project
Loading
Milestones
Filter by milestone
Loading
Assignee
Filter by who’s assigned
Sort
Sort by
Newest Oldest Most commented Least commented Recently updated Least recently updated Best match
Most reactions
👍 👎 😄 🎉 😕 ❤️ 🚀 👀

Issues list

Finding differentially abundant features between metagenomic and metatranscriptomic datasets
#80 opened Feb 1, 2025 by johnne
GLM Function in Aldex using summary for models with multiple levels.
#77 opened Oct 7, 2024 by schyells
Error in var(x) : is.atomic(y) is not TRUE
#76 opened Sep 7, 2024 by Liviacmg
@ggloor
5
pairwise T-test always set to FALSE in aldex() function
#75 opened Jun 1, 2024 by Yixuan39
3
Feature request: implement robust regression in glm to minimizes the influence of outliers
#74 opened Apr 23, 2024 by aimirza
Feature Request: Support for Using Features/Taxa/Genes as Explanatory Variables in aldex.glm
#73 opened Apr 23, 2024 by aimirza
Error when running run_aldex with kruskal or glm_anova for more than 2 level comparisons on "microbiomeMarker" package
#72 opened Mar 25, 2024 by LauGuaUuu
Rearranging dataframe changes output and Benjamini-Hochberg corrected p-value estimates differ between Bioconductor and developer version
#70 opened Feb 2, 2024 by wiederkf
Asymmetric datasets
#69 opened Jan 10, 2024 by vyom84
ALDEx2 new version (1.32.0) output effect size difference from (1.28.1)
#67 opened Oct 25, 2023 by davis-rudolfs
2
How to perform pairwise comparisons between three or more groups in R
#58 opened Jun 24, 2023 by LeandroD94
5
aldex.corr giving unexpected results
#54 opened Apr 24, 2023 by LunavdL
2
Log fold change with 95% confidence intervals
#50 opened Nov 25, 2022 by andrewmaltezthomas
Working with multiple timepoints in aldex.glm( )
#37 opened Jan 16, 2021 by mirpie
Aldex.clr object subsetting description
#30 opened Jul 20, 2020 by K-Pimentel
2
alr transformation method?
#24 opened Jun 24, 2020 by aimirza
12
Feature Request: Support for longitudinal/repeated measures data
#14 opened May 15, 2019 by mhibberd
ProTip! Type g p on any issue or pull request to go back to the pull request listing page.