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Releases: glygener/glygen-glycan-pipeline

For-Release-2.7

16 Sep 19:27
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  • Added mw_refmet_mapping_result.tsv - a new resource we are implementing that contains monosaccharide information. Please add the xrefs on your end.
  • Updated the user submitted data to tsv format: 1-s2.0-S1535947624000070-mmc5.tsv and 1-s2.0-S1535947624000070-mmc7.tsv
  • Added bovine files for glyconnect, mcw, and dataset ID to OGlcNAcAtlas rows.
  • The file previously named allbiomarkers.tsv has been renamed to oncomx.tsv. This change reflects the new organization by the BiomarkerKB team, which now separates their data by resource. The oncomx.tsv file will now include all protein and glycan biomarker data going forward.

For Release 2.6

27 Jun 06:06
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  • Please use the SNFG files (PubChem_substance_compound.csv and sia-table2.tsv) to create an SNFG xref file and map these SIDs/CIDs to GlyTouCan. These files also contain names, which you might be able to add to your names.tsv file. Ticket #843 has more information if needed.
  • Added arabidopsis files for glyconnect, mcw, and dataset ID to OGlcNAcAtlas rows
  • Two new user submitted data added:1-s2.0-S1535947624000070-mmc5.xlsx and 1-s2.0-S1535947624000070-mmc7.xlsx

For 2.5 Release

27 Jun 06:05
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For-Release-2.5

Updated BiomarkerKB file name to reflect change in downloads folder, …