Add toggleRenderMatrix option to hide SNPs in the Matrix

[6br]

Issue #35
I fixed the Schematize. Further, I found CompressedViewSwitch won't work if default is true. I also fixed this.

[josiahseaman]

Wouldn't you need to also modify or switch renderAllConnectors?

[josiahseaman]

I'm not sure the spec for this quite makes sense. The goal is likely to simplify the view. So then shouldn't we make all component the same width? Shouldn't connectors also be removed? Doesn't something like a VerticalCompression rearrangement make sense as the default here?

Using Vertical Compression and thinner row size shows allele frequencies.

The code works as is, but I think it needs more.

[josiahseaman]

• Connectors
• Vertical compression
• Width compression
• Thought about any other usability improvements (path name from cell mouseover?)

[6br]

I'm not persuaded to remove connections, because vertical compression looks enough compressed. Removing connections lose allele frequency information. However, for evaluation, I add remove connections toggle.

Here we have four options.
(1) Vertical Compression: Thin vertical size.
(2) Width Compression: Remove all matrix and adjust the same width of Component.
(2-1) Render connectors: Remove all connection.
(2-2) Width Scaling Factor: When I remove all matrix and squeezed down to one bin for each component, I figure out that each component becomes hard to see. I think each component should be wider than one bin. That's the reason I changed the scaling factor.
I'd like to reduce the number of options.

We'd need default options. My recommendation is as follows:
(A) Default: (1)disabled (2)disabled (2-1)enabled
(B) SV w/o Phasing: (1)enabled (2)enabled (2-1)enabled (2-2)3
(C) Only SV: (1)disabled (2)enabled (2-1)enabled (2-2)3

[6br]

Default

SV w/o Phasing

Only SV

[6br]

Connector Removed

[6br]

Another example: