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Fix paths in scripts..
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gzuidhof committed Jun 22, 2016
1 parent e1275dc commit b92d095
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Showing 15 changed files with 15 additions and 15 deletions.
2 changes: 1 addition & 1 deletion config/resnet32_09.ini
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Expand Up @@ -8,7 +8,7 @@ n_classes: 2
channels: 1
subset: None
filenames_train: /scratch-shared/vdgugten/data/cadOWN_0.5mm_96x96_xy_xz_yz/subset[1234567]/*/*.pkl.gz
filenames_validation: /scratch-shared/vdgugten/data/cadOWN_0.5mm_96x06_xy_xz_yz/subset[8]/*/*.pkl.gz
filenames_validation: /scratch-shared/vdgugten/data/cadOWN_0.5mm_96x96_xy_xz_yz/subset[8]/*/*.pkl.gz
data_folder: None ;not used

[network]
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2 changes: 1 addition & 1 deletion config/resnet32_12.ini
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Expand Up @@ -8,7 +8,7 @@ n_classes: 2
channels: 1
subset: None
filenames_train: /scratch-shared/vdgugten/data/cadOWN_0.5mm_96x96_xy_xz_yz/subset[3456789]/*/*.pkl.gz
filenames_validation: /scratch-shared/vdgugten/data/cadOWN_0.5mm_96x06_xy_xz_yz/subset[0]/*/*.pkl.gz
filenames_validation: /scratch-shared/vdgugten/data/cadOWN_0.5mm_96x96_xy_xz_yz/subset[0]/*/*.pkl.gz
data_folder: None ;not used

[network]
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2 changes: 1 addition & 1 deletion config/resnet32_34.ini
Original file line number Diff line number Diff line change
Expand Up @@ -8,7 +8,7 @@ n_classes: 2
channels: 1
subset: None
filenames_train: /scratch-shared/vdgugten/data/cadOWN_0.5mm_96x96_xy_xz_yz/subset[0156789]/*/*.pkl.gz
filenames_validation: /scratch-shared/vdgugten/data/cadOWN_0.5mm_96x06_xy_xz_yz/subset[2]/*/*.pkl.gz
filenames_validation: /scratch-shared/vdgugten/data/cadOWN_0.5mm_96x96_xy_xz_yz/subset[2]/*/*.pkl.gz
data_folder: None ;not used

[network]
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2 changes: 1 addition & 1 deletion config/resnet32_56.ini
Original file line number Diff line number Diff line change
Expand Up @@ -8,7 +8,7 @@ n_classes: 2
channels: 1
subset: None
filenames_train: /scratch-shared/vdgugten/data/cadOWN_0.5mm_96x96_xy_xz_yz/subset[0124789]/*/*.pkl.gz
filenames_validation: /scratch-shared/vdgugten/data/cadOWN_0.5mm_96x06_xy_xz_yz/subset[3]/*/*.pkl.gz
filenames_validation: /scratch-shared/vdgugten/data/cadOWN_0.5mm_96x96_xy_xz_yz/subset[3]/*/*.pkl.gz
data_folder: None ;not used

[network]
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2 changes: 1 addition & 1 deletion config/resnet32_78.ini
Original file line number Diff line number Diff line change
Expand Up @@ -8,7 +8,7 @@ n_classes: 2
channels: 1
subset: None
filenames_train: /scratch-shared/vdgugten/data/cadOWN_0.5mm_96x96_xy_xz_yz/subset[0123459]/*/*.pkl.gz
filenames_validation: /scratch-shared/vdgugten/data/cadOWN_0.5mm_96x06_xy_xz_yz/subset[6]/*/*.pkl.gz
filenames_validation: /scratch-shared/vdgugten/data/cadOWN_0.5mm_96x96_xy_xz_yz/subset[6]/*/*.pkl.gz
data_folder: None ;not used

[network]
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2 changes: 1 addition & 1 deletion config/resnet44_09.ini
Original file line number Diff line number Diff line change
Expand Up @@ -8,7 +8,7 @@ n_classes: 2
channels: 1
subset: None
filenames_train: /scratch-shared/vdgugten/data/cadOWN_0.5mm_96x96_xy_xz_yz/subset[1234567]/*/*.pkl.gz
filenames_validation: /scratch-shared/vdgugten/data/cadOWN_0.5mm_96x06_xy_xz_yz/subset[8]/*/*.pkl.gz
filenames_validation: /scratch-shared/vdgugten/data/cadOWN_0.5mm_96x96_xy_xz_yz/subset[8]/*/*.pkl.gz
data_folder: None ;not used

[network]
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2 changes: 1 addition & 1 deletion config/resnet44_12.ini
Original file line number Diff line number Diff line change
Expand Up @@ -8,7 +8,7 @@ n_classes: 2
channels: 1
subset: None
filenames_train: /scratch-shared/vdgugten/data/cadOWN_0.5mm_96x96_xy_xz_yz/subset[3456789]/*/*.pkl.gz
filenames_validation: /scratch-shared/vdgugten/data/cadOWN_0.5mm_96x06_xy_xz_yz/subset[0]/*/*.pkl.gz
filenames_validation: /scratch-shared/vdgugten/data/cadOWN_0.5mm_96x96_xy_xz_yz/subset[0]/*/*.pkl.gz
data_folder: None ;not used

[network]
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2 changes: 1 addition & 1 deletion config/resnet44_34.ini
Original file line number Diff line number Diff line change
Expand Up @@ -8,7 +8,7 @@ n_classes: 2
channels: 1
subset: None
filenames_train: /scratch-shared/vdgugten/data/cadOWN_0.5mm_96x96_xy_xz_yz/subset[0156789]/*/*.pkl.gz
filenames_validation: /scratch-shared/vdgugten/data/cadOWN_0.5mm_96x06_xy_xz_yz/subset[2]/*/*.pkl.gz
filenames_validation: /scratch-shared/vdgugten/data/cadOWN_0.5mm_96x96_xy_xz_yz/subset[2]/*/*.pkl.gz
data_folder: None ;not used

[network]
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2 changes: 1 addition & 1 deletion config/resnet44_56.ini
Original file line number Diff line number Diff line change
Expand Up @@ -8,7 +8,7 @@ n_classes: 2
channels: 1
subset: None
filenames_train: /scratch-shared/vdgugten/data/cadOWN_0.5mm_96x96_xy_xz_yz/subset[0124789]/*/*.pkl.gz
filenames_validation: /scratch-shared/vdgugten/data/cadOWN_0.5mm_96x06_xy_xz_yz/subset[3]/*/*.pkl.gz
filenames_validation: /scratch-shared/vdgugten/data/cadOWN_0.5mm_96x96_xy_xz_yz/subset[3]/*/*.pkl.gz
data_folder: None ;not used

[network]
Expand Down
2 changes: 1 addition & 1 deletion config/resnet44_78.ini
Original file line number Diff line number Diff line change
Expand Up @@ -8,7 +8,7 @@ n_classes: 2
channels: 1
subset: None
filenames_train: /scratch-shared/vdgugten/data/cadOWN_0.5mm_96x96_xy_xz_yz/subset[0123459]/*/*.pkl.gz
filenames_validation: /scratch-shared/vdgugten/data/cadOWN_0.5mm_96x06_xy_xz_yz/subset[6]/*/*.pkl.gz
filenames_validation: /scratch-shared/vdgugten/data/cadOWN_0.5mm_96x96_xy_xz_yz/subset[6]/*/*.pkl.gz
data_folder: None ;not used

[network]
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2 changes: 1 addition & 1 deletion scripts/resnet_scripts/resnet32_09.sh
Original file line number Diff line number Diff line change
Expand Up @@ -17,4 +17,4 @@ cd $HOME/luna16/src/deep

echo "starting python"
export THEANO_FLAGS='mode=FAST_RUN,device=gpu,floatX=float32,lib.cnmem=1'
srun -u python train.py ../../config/resnet44_09.ini
srun -u python train.py ../../config/resnet32_09.ini
2 changes: 1 addition & 1 deletion scripts/resnet_scripts/resnet32_12.sh
Original file line number Diff line number Diff line change
Expand Up @@ -17,4 +17,4 @@ cd $HOME/luna16/src/deep

echo "starting python"
export THEANO_FLAGS='mode=FAST_RUN,device=gpu,floatX=float32,lib.cnmem=1'
srun -u python train.py ../../config/resnet44_12.ini
srun -u python train.py ../../config/resnet32_12.ini
2 changes: 1 addition & 1 deletion scripts/resnet_scripts/resnet32_34.sh
Original file line number Diff line number Diff line change
Expand Up @@ -17,4 +17,4 @@ cd $HOME/luna16/src/deep

echo "starting python"
export THEANO_FLAGS='mode=FAST_RUN,device=gpu,floatX=float32,lib.cnmem=1'
srun -u python train.py ../../config/resnet44_34.ini
srun -u python train.py ../../config/resnet32_34.ini
2 changes: 1 addition & 1 deletion scripts/resnet_scripts/resnet32_56.sh
Original file line number Diff line number Diff line change
Expand Up @@ -17,4 +17,4 @@ cd $HOME/luna16/src/deep

echo "starting python"
export THEANO_FLAGS='mode=FAST_RUN,device=gpu,floatX=float32,lib.cnmem=1'
srun -u python train.py ../../config/resnet44_56.ini
srun -u python train.py ../../config/resnet32_56.ini
2 changes: 1 addition & 1 deletion scripts/resnet_scripts/resnet32_78.sh
Original file line number Diff line number Diff line change
Expand Up @@ -17,4 +17,4 @@ cd $HOME/luna16/src/deep

echo "starting python"
export THEANO_FLAGS='mode=FAST_RUN,device=gpu,floatX=float32,lib.cnmem=1'
srun -u python train.py ../../config/resnet44_78.ini
srun -u python train.py ../../config/resnet32_78.ini

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