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edited index.md, changed bcbio:: to bcbioR:: and added missing parent…
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…hesis for scRNAseq and ChipSeq template deployment code chunk
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upendrabhattarai committed Jan 23, 2025
1 parent c6ea913 commit 6745c81
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Expand Up @@ -77,17 +77,17 @@ bcbioR::bcbio_templates(type="rnaseq", outpath="reports")
Please, change to this common library path to perform your analysis:

```
bcbio::use_library("/n/app/bcbio/R4.3.1_singlecell")
bcbioR::bcbio_templates(type="singlecell, outpath="reports")
bcbioR::use_library("/n/app/bcbio/R4.3.1_singlecell")
bcbioR::bcbio_templates(type="singlecell", outpath="reports")
```

## ChipSeq

Please, change to this common library path to perform your analysis:

```
bcbio::use_library("/n/app/bcbio/R4.3.1_chipseq")
bcbioR::bcbio_templates(type="chipseq, outpath="reports")
bcbioR::use_library("/n/app/bcbio/R4.3.1_chipseq")
bcbioR::bcbio_templates(type="chipseq", outpath="reports")
```

# bcbioR supported templates
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