Gordon Research Conference: Marine Microbes 2022

Using genome-scale metabolic models to estimate Carbon Use Efficiency in marine heterotrophic bacteria

Presented by: Helen Scott

Note

My apologies, due to technical problems the ipynb of the analysis is not currently available. Once I return from the GRC I will add all scripts needed to re-create the figures in the poster here.

GEM2CUE Package

The python package used to calculate CUE is available here: https://github.com/hgscott/GEM2CUE Note, that to install the package you will have to clone/download the repository and install it from your local copy, i.e. python3 -m pip install <path>