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@hms-dbmi

Harvard Medical School - Department of Biomedical Informatics

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  1. UpSetR UpSetR Public

    An R implementation of the UpSet set visualization technique published by Lex, Gehlenborg, et al..

    R 775 158

  2. scde scde Public

    R package for analyzing single-cell RNA-seq data

    R 173 66

  3. viv viv Public

    Library for multiscale visualization of high-resolution multiplexed bioimaging data on the web. Directly renders Zarr and OME-TIFF.

    JavaScript 298 47

Repositories

Showing 10 of 367 repositories
  • udi-grammar Public

    The Universal Discovery Interface Grammar.

    hms-dbmi/udi-grammar’s past year of commit activity
    TypeScript 0 MIT 0 0 2 Updated Feb 25, 2025
  • pic-sure-bdc-release-control Public
    hms-dbmi/pic-sure-bdc-release-control’s past year of commit activity
    1 Apache-2.0 8 0 0 Updated Feb 24, 2025
  • pic-sure-metadata-curation Public

    Parse and generate variable-level data to be exposed through the search interface.

    hms-dbmi/pic-sure-metadata-curation’s past year of commit activity
    SAS 2 Apache-2.0 2 0 0 Updated Feb 24, 2025
  • Access-to-Data-using-PIC-SURE-API Public
    hms-dbmi/Access-to-Data-using-PIC-SURE-API’s past year of commit activity
    Jupyter Notebook 6 Apache-2.0 8 0 0 Updated Feb 24, 2025
  • vizarr Public

    A minimal Zarr image viewer based on Viv.

    hms-dbmi/vizarr’s past year of commit activity
    TypeScript 136 MIT 18 18 (1 issue needs help) 11 Updated Feb 24, 2025
  • dbmisvc-test Public
    hms-dbmi/dbmisvc-test’s past year of commit activity
    Python 0 0 0 0 Updated Feb 24, 2025
  • i2b2v2-webclient Public
    hms-dbmi/i2b2v2-webclient’s past year of commit activity
    JavaScript 2 4 1 0 Updated Feb 24, 2025
  • pic-sure-hpds Public
    hms-dbmi/pic-sure-hpds’s past year of commit activity
    Java 3 Apache-2.0 6 0 7 Updated Feb 24, 2025
  • PIC-SURE-Frontend Public

    A frontend for the PIC-SURE API

    hms-dbmi/PIC-SURE-Frontend’s past year of commit activity
    TypeScript 1 Apache-2.0 0 0 9 Updated Feb 24, 2025
  • hypatio-app Public
    hms-dbmi/hypatio-app’s past year of commit activity
    Python 4 0 0 9 Updated Feb 24, 2025
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