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fix Rd

fix Rd #119

Workflow file for this run

on:
push:
branches: [main, ci]
pull_request:
branches: [main]
name: R-CMD-check-proj-cmake
jobs:
R-CMD-check-proj:
runs-on: ${{ matrix.config.os }}
name: ${{ matrix.config.os }} (${{ matrix.config.r }}) (${{ matrix.config.PROJ_VERSION }})
strategy:
fail-fast: false
matrix:
config:
# - {os: macos-latest, r: 'release', PROJ_VERSION: 'cran'}
# - {os: windows-latest, r: 'release', PROJ_VERSION: 'cran'}
- {os: ubuntu-latest, r: 'devel', http-user-agent: 'release', PROJ_VERSION: '9.3.0'}
- {os: ubuntu-latest, r: 'release', PROJ_VERSION: '9.3.0'}
# - {os: ubuntu-latest, r: 'oldrel-1', PROJ_VERSION: '9.3.0'}
# - {os: ubuntu-latest, r: 'release', PROJ_VERSION: '8.2.1'}
# - {os: ubuntu-latest, r: 'release', PROJ_VERSION: '7.2.1'}
# - {os: ubuntu-latest, r: 'release', PROJ_VERSION: '6.3.1'}
# - {os: ubuntu-latest, r: 'release', PROJ_VERSION: '5.2.0'}
# - {os: ubuntu-latest, r: 'release', PROJ_VERSION: '4.9.3'}
env:
GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
R_KEEP_PKG_SOURCE: yes
PROJ_NUMBER: ${{ matrix.config.PROJ_VERSION }}
# cmake does not understand "-1" as "all cpus"
steps:
# - name: Install macOS system dependencies
# if: runner.os == 'macOS'
# run: |
# brew install openssl
# brew install proj
- uses: actions/checkout@v3
- uses: r-lib/actions/setup-pandoc@v2
- uses: r-lib/actions/setup-r@v2
with:
r-version: ${{ matrix.config.r }}
http-user-agent: ${{ matrix.config.http-user-agent }}
use-public-rspm: true
# - name: Install ubuntu system dependencies
# if: runner.os == 'Linux'
# run: |
# #apt-get install libcurl4-openssl-dev libsqlite3-dev libtiff-dev
# wget https://download.osgeo.org/proj/proj-$PROJ_NUMBER.tar.gz
# tar zxvf proj-$PROJ_NUMBER.tar.gz
# cd proj-$PROJ_NUMBER
# ./configure --prefix /usr
# make install -j4
# sudo make install
# sudo ldconfig
- name: Install ubuntu cmake build system dependencies
if: runner.os == 'Linux'
run: |
sudo apt-get update -y && sudo apt-get install -y libcurl4-openssl-dev libsqlite3-dev libtiff-dev cmake libssl-dev libxml2-dev
wget https://download.osgeo.org/proj/proj-$PROJ_NUMBER.tar.gz
tar zxvf proj-$PROJ_NUMBER.tar.gz
cd proj-$PROJ_NUMBER
mkdir build
cd build
#CMAKE_CORES=${NCPUS}
#if [ "${CMAKE_CORES}" = "-1" ]; then
# CMAKE_CORES=$(nproc --all)
#fi
cmake .. -DCMAKE_INSTALL_PREFIX=/usr
sudo cmake --build . --target install ##--parallel "$CMAKE_CORES"
cd ../..
sudo rm -rf proj-$PROJ_NUMBER
rm proj-$PROJ_NUMBER.tar.gz
sudo ldconfig
sudo projsync --source-id fr_ign --system-directory
# uses: r-lib/actions/setup-r-dependencies@v2
# with:
# extra-packages: any::rcmdcheck
# needs: check
- name: Install package installer
run: Rscript -e 'install.packages(c("pak"), repos = "https://cran.rstudio.com/")'
- name: Install package deps
run: Rscript -e 'pak::pak(c("lifecycle", "wk", "testthat", "spelling", "knitr", "rmarkdown", "rcmdcheck"))'
- uses: r-lib/actions/check-r-package@v2
with:
upload-snapshots: false