Merge pull request #69 from ghuls/fix_specifying_start_coordinate

Fix specifying start coordinate of bigbedtobed and bigwigtobedgraph.
jackh726 · Jan 8, 2025 · 992e052 · 992e052
2 parents 0ea12f5 + 519e7f0
commit 992e052
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diff --git a/bigtools/src/utils/cli/bigbedtobed.rs b/bigtools/src/utils/cli/bigbedtobed.rs
@@ -67,7 +67,7 @@ pub fn bigbedtobed(args: BigBedToBedArgs) -> Result<(), Box<dyn Error>> {
     let bigbed = BigBedRead::open_file(&bigbedpath)?;
     let bed = File::create(bedpath)?;
 
-    if args.start.is_some() || args.end.is_some() & args.chrom.is_none() {
+    if (args.start.is_some() || args.end.is_some()) && args.chrom.is_none() {
         eprintln!("Cannot specify --start or --end without specifying --chrom.");
         return Ok(());
     }

diff --git a/bigtools/src/utils/cli/bigwigtobedgraph.rs b/bigtools/src/utils/cli/bigwigtobedgraph.rs
@@ -63,7 +63,7 @@ pub fn bigwigtobedgraph(args: BigWigToBedGraphArgs) -> Result<(), Box<dyn Error>
     let bigwig = BigWigRead::open_file(&bigwigpath)?;
     let bedgraph = File::create(bedgraphpath)?;
 
-    if args.start.is_some() || args.end.is_some() & args.chrom.is_none() {
+    if (args.start.is_some() || args.end.is_some()) && args.chrom.is_none() {
         eprintln!("Cannot specify --start or --end without specifying --chrom.");
         return Ok(());
     }