Merge branch 'master' into devel

.Rbuildignore

@@ -16,3 +16,4 @@
 ^revdep$
 ^index\.Rmd$
 ^index\.md$
+^CRAN-SUBMISSION$

CRAN-SUBMISSION

@@ -0,0 +1,3 @@
+Version: 0.4.1
+Date: 2024-02-22 08:43:54 UTC
+SHA: 2faf7dcc409fc4124ebf75498ad1832c6bd5c7f4

DESCRIPTION

@@ -1,6 +1,6 @@
 Package: tidycomm
 Title: Data Modification and Analysis for Communication Research
-Version: 0.4.0
+Version: 0.4.1
 Authors@R: c(
     person("Julian", "Unkel", , "[email protected]", role = c("aut", "cre"),
            comment = c(ORCID = "0000-0001-9568-7041")),

NEWS.md

@@ -1,4 +1,4 @@
-# tidycomm 0.4.0
+# tidycomm 0.4.1
 
 # tidycomm 0.3.0
 

R/data.R

@@ -1,6 +1,6 @@
 #' Worlds of Journalism sample data
 #'
-#' A subset of data from the [Worlds of Journalism](https://www.worldsofjournalism.org/)
+#' A subset of data from the [Worlds of Journalism](https://worldsofjournalism.org/)
 #' 2012-16 study containing survey data of 1,200 journalists from five European
 #' countries.
 #'
@@ -38,7 +38,7 @@
 #'   \item{trust_politicians}{Trust placed in politicians in general,
 #'     scale from 1 (*no trust at all*) to 5 (*complete trust*)}
 #' }
-#' @source \url{https://worldsofjournalism.org/data/data-and-key-tables-2012-2016}
+#' @source \samp{https://worldsofjournalism.org/data/data-and-key-tables-2012-2016}
 "WoJ"
 
 #' Facebook posts reliability test
@@ -84,7 +84,7 @@
 #' Kümpel, A. S., & Unkel, J. (2020). Negativity wins at last: How presentation
 #' order and valence of user comments affect perceptions of journalistic quality.
 #' Journal of Media Psychology: Theories, Methods, and Applications, 32(2), 89–99.
-#' \url{https://doi.org/10.1027/1864-1105/a000261}
+#' \doi{10.1027/1864-1105/a000261}
 #'
 #' @format A data frame of 630 observations and 15 variables:
 #' \describe{

R/describe.R

@@ -16,8 +16,9 @@
 #' - Range: difference between Min and Max
 #' - CI_95_LL: \eqn{M - Q(0.975) \times \frac{SD}{\sqrt{N}}} where \eqn{Q(0.975)} denotes Student t's [stats::quantile] function with a probability of \eqn{0.975} and \eqn{N-1} degrees of freedom
 #' - CI_95_UL: \eqn{M + Q(0.975) \times \frac{SD}{\sqrt{N}}} where \eqn{Q(0.975)} denotes Student t's [stats::quantile] function with a probability of \eqn{0.975} and \eqn{N-1} degrees of freedom
-#' - Skewness: traditional Fisher-Pearson coefficient of skewness of valid cases as per \eqn{\frac{\frac{1}{N} \sum\limits_{i=1}^N (x_{i}-\overline{x})^3}{[\frac{1}{N}\sum\limits_{i=1}^N (x_{i}-\overline{x})^2]^{3/2}}} where \eqn{\overline{x}} denotes \eqn{M}, following [Doane & Seward, 2011, p. 6, 1a](\doi{10.1080/10691898.2011.11889611})
-#' - Kurtosis: empirical sample kurtosis (i.e., standardized fourth population moment about the mean) as per \eqn{\frac{\sum (x-\overline{x})^4 / N}{(\sum (x-\overline{x})^2 / N)^2}}, following [DeCarlo, 1997, p. 292, b2](\doi{10.1037/1082-989X.2.3.292})
+#' - Skewness: traditional Fisher-Pearson coefficient of skewness of valid cases as per \eqn{\frac{\frac{1}{N} \sum\limits_{i=1}^N (x_{i}-\overline{x})^3}{[\frac{1}{N}\sum\limits_{i=1}^N (x_{i}-\overline{x})^2]^{3/2}}}
+#' where \eqn{\overline{x}} denotes \eqn{M}, following Doane & Seward (2011, p. 6, 1a). See DOI \doi{10.1080/10691898.2011.11889611}.
+#' - Kurtosis: empirical sample kurtosis (i.e., standardized fourth population moment about the mean) as per \eqn{\frac{\sum (x-\overline{x})^4 / N}{(\sum (x-\overline{x})^2 / N)^2}}, following DeCarlo (1997, p. 292, b2). See DOI \doi{10.1037/1082-989X.2.3.292}.
 #'
 #' @param data a [tibble][tibble::tibble-package] or a [tdcmm] model
 #' @param ... Variables to describe (column names). Leave empty to describe all

R/scaling.R

@@ -646,7 +646,7 @@ recode_cat_scale <- function(data, ..., assign = NULL,
 #' variables based on a specified lower end, upper end, and intermediate breaks.
 #' The intervals created include the right endpoint of the interval. For example,
 #' breaks = c(2, 3) with lower_end = 1 and upper_end = 5 creates intervals from
-#' 1 to ≤ 2, >2 to ≤ 3, and >3 to ≤ 5. If the lower or upper ends are not provided,
+#' 1 to <= 2, >2 to <= 3, and >3 to <= 5. If the lower or upper ends are not provided,
 #' the function defaults to the minimum and maximum values of the data and issues
 #' a warning. This default behavior is prone to errors, however, because a scale may not
 #' include its actual lower and upper ends which might in turn affect the recoding

R/tdcmm_class.R

@@ -197,6 +197,7 @@ model.tdcmm <- function(x, ...) {
 #' @family visualize
 #'
 #' @examples
+#' \dontrun{
 #' WoJ %>%
 #'   describe() %>%
 #'   visualize()
@@ -215,6 +216,7 @@ model.tdcmm <- function(x, ...) {
 #' WoJ %>%
 #'   crosstab(reach, employment) %>%
 #'   visualize()
+#'
 #' fbposts %>%
 #'   crosstab(coder_id, type, percentages = TRUE) %>%
 #'   visualize()
@@ -263,6 +265,7 @@ model.tdcmm <- function(x, ...) {
 #'   describe_cat() %>%
 #'   visualize() +
 #'     ggplot2::scale_fill_grey()
+#'}
 #'
 #' @export
 visualize <- function(x, ..., .design = design_lmu()) {

R/unianova.R

@@ -23,8 +23,10 @@
 #'
 #' @examples
 #' WoJ %>% unianova(employment, autonomy_selection, autonomy_emphasis)
-#' WoJ %>% unianova(employment)
 #' WoJ %>% unianova(employment, descriptives = TRUE, post_hoc = TRUE)
+#' \dontrun{
+#' WoJ %>% unianova(employment)
+#' }
 #'
 #' @export
 unianova <- function(data, group_var, ..., descriptives = FALSE, post_hoc = FALSE) {

R/utils.R

@@ -131,7 +131,7 @@ format_value <- function(x, d) trimws(format(round(x, d), nsmall = d))
 
 #' Helper function for labelling purposes
 #'
-#' @param numeric share between 0 and 1
+#' @param x share between 0 and 1
 #'
 #' @return a string with formatted % (rounded and suffixed)
 #'

cran-comments.md

@@ -1,4 +1,10 @@
-This update raises version to 0.4.0  since it introduces new tdcmm/tibble returns and new functions, such as partial correlation, linear regression, one-sample t-test, scale transformations, percentiles, visualizations, and additional datasets (snscomments and incvlcomments).
+## Resubmission
+This is a resubmission. In this version we have:
+
+* Corrected the DOI links in the documentation. They are now properly formatted as standalone \doi{} commands without being encapsulated within any other markup, as per the CRAN guidelines.
+
+## About
+This update elevates the version directly to 0.4.1 as it introduces significant enhancements including new tdcmm/tibble returns and functions such as partial correlation, linear regression, one-sample t-test, scale transformations, percentiles, visualizations, and additional datasets (snscomments and incvlcomments). Additionally, we have applied a minor patch to encase the 'visualize()' examples within 'dontrun()' to reduce the elapsed time during the compilation of these examples.
 
 ## Test environments
 
@@ -8,6 +14,28 @@ This update raises version to 0.4.0  since it introduces new tdcmm/tibble return
 * Ubuntu 20.04 (on GitHub Actions), devel
 * Windows latest (on GitHub Actions), release
 
+There were 3 NOTES identified when testing the package on Windows using R-hub, but all are referenced in the open issues of the R-hub package and thus appear to be unrelated to this package:
+
+> checking for non-standard things in the check directory ... NOTE
+Found the following files/directories:
+  ''NULL''
+
+> checking for detritus in the temp directory ... NOTE
+Found the following files/directories:
+  'lastMiKTeXException'
+
+> checking HTML version of manual ... NOTE
+   Skipping checking math rendering: package 'V8' unavailable
+
+
 ## R CMD check results
 
 0 errors | 0 warnings | 0 note
+
+
+## revdepcheck results
+
+We checked 0 reverse dependencies, comparing R CMD check results across CRAN and dev versions of this package.
+
+ * We saw 0 new problems
+ * We failed to check 0 packages

revdep/.gitignore

@@ -4,3 +4,4 @@ checks.noindex
 library.noindex
 data.sqlite
 *.html
+cloud.noindex