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<article id="content"> | ||
<header> | ||
<h1 class="title">Module <code>traceon.focus</code></h1> | ||
</header> | ||
<section id="section-intro"> | ||
<p>Module containing a single function to find the focus of a beam of electron trajecories.</p> | ||
</section> | ||
<section> | ||
</section> | ||
<section> | ||
</section> | ||
<section> | ||
<h2 class="section-title" id="header-functions">Functions</h2> | ||
<dl> | ||
<dt id="traceon.focus.focus_position"><code class="name flex"> | ||
<span>def <span class="ident">focus_position</span></span>(<span>positions)</span> | ||
</code></dt> | ||
<dd> | ||
<div class="desc"><p>Find the focus of the given trajectories (which are returned from <code><a title="traceon.tracing.Tracer.__call__" href="tracing.html#traceon.tracing.Tracer.__call__">Tracer.__call__()</a></code>). | ||
The focus is found using a least square method by considering the final positions and velocities of | ||
the given trajectories and linearly extending the trajectories backwards.</p> | ||
<h2 id="parameters">Parameters</h2> | ||
<dl> | ||
<dt><strong><code>positions</code></strong> : <code>iterable</code> of <code>(N,6) np.ndarray float64</code></dt> | ||
<dd>Trajectories of electrons, as returned by <code><a title="traceon.tracing.Tracer.__call__" href="tracing.html#traceon.tracing.Tracer.__call__">Tracer.__call__()</a></code></dd> | ||
</dl> | ||
<h2 id="returns">Returns</h2> | ||
<p>(3,) np.ndarray of float64, representing the position of the focus</p></div> | ||
</dd> | ||
</dl> | ||
</section> | ||
<section> | ||
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<div class="toc"> | ||
<ul></ul> | ||
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<ul id="index"> | ||
<li><h3>Super-module</h3> | ||
<ul> | ||
<li><code><a title="traceon" href="index.html">traceon</a></code></li> | ||
</ul> | ||
</li> | ||
<li><h3><a href="#header-functions">Functions</a></h3> | ||
<ul class=""> | ||
<li><code><a title="traceon.focus.focus_position" href="#traceon.focus.focus_position">focus_position</a></code></li> | ||
</ul> | ||
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