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Update mamba-org/provision-with-micromamba to mamba-org/setup-micromamba #26

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merged 3 commits into from
Jan 23, 2025
Merged

Update mamba-org/provision-with-micromamba to mamba-org/setup-micromamba #26

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8905236
Update mamba-org/provision-with-micromamba to mamba-org/setup-micromamba
tjstruck Jan 22, 2025
a32c4f4
Remove license line from pyproject.toml as it causes an error with in…
tjstruck Jan 23, 2025
fc06908
Remove coverage check from GitHub Actions build.yml
tjstruck Jan 23, 2025
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11 changes: 2 additions & 9 deletions .github/workflows/build.yml
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Original file line number Diff line number Diff line change
Expand Up @@ -17,18 +17,11 @@ jobs:
with:
python-version: ${{ matrix.python-version }}
- name: Add micromamba to system path
uses: mamba-org/provision-with-micromamba@main
uses: mamba-org/setup-micromamba@main
with:
environment-name: donni
activate-environment: donni
environment-file: environment.yml
- name: Test with pytest
run: |
micromamba run -n donni pytest --cov=. --cov-report term-missing -vv tests/test_*.py
micromamba run -n donni coverage xml
- name: Upload coverage reports to Codecov
uses: codecov/codecov-action@v3
with:
name: codecov-umbrella
fail_ci_if_error: true
env_vars: OS,PYTHON
micromamba run -n donni pytest -vv tests/test_*.py
3 changes: 1 addition & 2 deletions pyproject.toml
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Expand Up @@ -8,7 +8,6 @@ version = "0.9.0"
description = "Demography Optimization via Neural Network Inference"
readme = "README.md"
requires-python = ">=3.7"
license = ""
dependencies = [
"dadi",
"python-irodsclient == 1.1.6",
Expand All @@ -26,4 +25,4 @@ path = "donni/__init__.py"
[tool.hatch.build.targets.sdist]
include = [
"/donni",
]
]
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