Installation

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DaminK edited this page Dec 1, 2021 · 3 revisions

Installation

Required Software

Required Files

Put the experimental data into resources/experiment/mouse-id/experiment-date/ with mouse-id and experiment-date being provided by you
- e.g. ../repository/resources/experiment/GN06/2021-01-20_10-15-16

Additional Notes

to use envs with Anaconda on Windows you may need to:
- download the buidling wheels for tables und h5py from here
- installing through pip leads to errors in other modules

For Users

For Devs

File Structure
Pipeline Steps
- Loading & Preprocessing
- Parcellation
- Filtering
- Condition Extraction
- Feature Calculation
- Recursive Feature Elimination
- Deconding
- Plotting

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