Release v1.7

CHANGELOG

@@ -1,4 +1,24 @@
 
+MiXCR 1.7 (29 Dec 2015)
+========================
+
+-- New feature (#8 and #36) that allows to extract actual reads that were used in each clone (for 
+   more details see documentation)
+-- Import of custom gene segment sequences (`mixcr importSegments ...`)
+-- Automated import of IMGT refenrence segment sequences (`mixcr importFromIMGT ...`)
+-- Beta feature: new aligner with support of big gaps (see "New aligner" section in documentation).
+-- Added new action `exportReads` which export initial reads aggregated by each clones to separate 
+   .fastq files
+-- Added new export options for `exportAlignments`: `-cloneId` (prints clone ID that aggregated 
+   corresponding alignment) and `-mapping` (same, with additional info on mapping type)
+-- Added new export option for `exportClones`: `-mapping` will pring all alignment IDs that were 
+   aggreafated by clone
+-- Added option `-n` (print only first n rows) to all `export` commands
+-- Added new assembler option: minimal clonal sequence length (`-OminimalClonalSequenceLength=...`)
+-- minor: minor improvements and bug fixes
+-- minor: version information embedded into jar file (try `mixcr -v`)
+
+
 MiXCR 1.6 ( 6 Oct 2015)
 ========================
 

CHANGELOG_CURRENT

@@ -1,11 +0,0 @@
-New feature (#8 and #36) that allows to extract actual reads that were used in each clone (for more details see documentation)
-Import of custom gene segment sequences (`mixcr importSegments ...`)
-Automated import of IMGT refenrence segment sequences (`mixcr importFromIMGT ...`)
-Beta feature: new aligner with support of big gaps (see "New aligner" section in documentation).
-Added new action `exportReads` which export initial reads aggregated by each clones to separate .fastq files
-Added new export options for `exportAlignments`: `-cloneId` (prints clone ID that aggregated corresponding alignment) and `-mapping` (same, with additional info on mapping type)
-Added new export option for `exportClones`: `-mapping` will pring all alignment IDs that were aggreafated by clone
-Added option `-n` (print only first n rows) to all `export` commands
-Added new assembler option: minimal clonal sequence length (`-OminimalClonalSequenceLength=...`)
-minor: minor improvements and bug fixes
-minor: version information embedded into jar file (try `mixcr -v`)

pom.xml

@@ -32,7 +32,7 @@
 
     <groupId>com.milaboratory</groupId>
     <artifactId>mixcr</artifactId>
-    <version>1.7-SNAPSHOT</version>
+    <version>1.7</version>
     <packaging>jar</packaging>
     <name>MiXCR</name>