Bayesian Inferential Regression for Differential Microbiome Analysis

A QIIME 2 plugin to generate and visualise microbial networks.

Functions for reproducibly Obtaining and Normalizing Data re-Used from Elsewhere

REference Sequence annotation and CuRatIon Pipeline

A full-featured IQ-TREE 2 plugin for QIIME 2.

A QIIME 2 implementation of SMURF

ATLAS - Three commands to start analyzing your metagenome data

A fast and scalable phylogenetic tree viewer for microbiome data analysis

QIIME 2 plugin for machine learning prediction of sample data.

SHallow shOtGUN profiler

Official repository for the QIIME 2 framework.