Code

Use host pool and action from core#70

Code

Merged

wenzeslaus merged 22 commits intomainncsu-landscape-dynamics/r.pops.spread:mainfrom use-actionsncsu-landscape-dynamics/r.pops.spread:use-actionsCopy head branch name to clipboardFeb 20, 2024

+176-47

Commits

Commits on Sep 26, 2023

• Use host pool and action from core

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  wenzeslaus

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Commits on Oct 10, 2023

• Remove unused Simulation from the code

  wenzeslaus

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• Merge main into feature

  wenzeslaus

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• Merge remote-tracking branch 'origin/main' into use-actions

  wenzeslaus

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• Switch pops-core to latest main

  wenzeslaus

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Commits on Nov 17, 2023

• adjust to new run_step, pops-core to latest multi-host

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Commits on Nov 20, 2023

• update to latest changes in multi-host

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Commits on Nov 21, 2023

• add movements

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• create pool vector before the main loop

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Commits on Nov 22, 2023

• Manage memory for hosts and set up pest-host-use and competency tables

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Commits on Nov 27, 2023

• Update to mutli-host with config

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Commits on Dec 1, 2023

• Initialize dispersers for output

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• Competency does not need explicit index type anymore

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• Dispersers are now always taken from pest pool in model

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• Pest-host-use table is now pest-host table

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• Update core

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• Use the complete competency table

  wenzeslaus

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Commits on Dec 18, 2023

• Test enabled mortality with mortality rate set to zero

  wenzeslaus

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Commits on Dec 19, 2023

• Fix susceptible < 0 error resulting from infected > host in input data (does not change results)

  wenzeslaus

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• Host pool now registered automatically to environment by host pool ctor

  wenzeslaus

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• Use pops-core with new checks and mortality updates

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• Update indenet

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