[ENH] Fix patch sampling for discontiguous case #1055
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| name: Build Wheels | |
| on: | |
| pull_request: | |
| paths: | |
| - "**.py" | |
| - "**.pxd" | |
| - "**.pyx" | |
| - "**" | |
| push: | |
| branches: [main] | |
| workflow_dispatch: | |
| permissions: | |
| contents: read # to fetch code (actions/checkout) | |
| concurrency: | |
| group: ${{ github.workflow }}-${{ github.head_ref || github.run_id }} | |
| cancel-in-progress: true | |
| jobs: | |
| create_artifacts_folder: | |
| name: Create Artifacts Folder | |
| runs-on: ubuntu-latest | |
| outputs: | |
| artifacts_folder: ${{ steps.set_folder.outputs.folder_name }} | |
| steps: | |
| - name: Set Artifacts Folder | |
| id: set_folder | |
| run: echo "folder_name=artifacts/${{ github.run_id }}" >> $GITHUB_ENV | |
| build_wheels: | |
| name: Build wheels on ${{ matrix.os[1] }} - ${{ matrix.os[2] }} with Python ${{ matrix.python[0] }} | |
| runs-on: ${{ matrix.os[0] }} | |
| strategy: | |
| # Ensure that a wheel builder finishes even if another fails | |
| fail-fast: false | |
| matrix: | |
| os: # see scipy wheels.yml GH actions | |
| - [ubuntu-22.04, manylinux, x86_64] | |
| - [macos-11, macosx, x86_64] | |
| # - [macos-12, macosx_*, arm64] | |
| - [windows-2019, win, AMD64] | |
| python: [["cp39", "3.9"], ["cp310", "3.10"], ["cp311", "3.11"], ["cp312", "3.12"]] | |
| # python[0] is used to specify the python versions made by cibuildwheel | |
| env: | |
| IS_32_BIT: ${{ matrix.os[2] == 'x86' }} | |
| steps: | |
| - name: Checkout scikit-tree | |
| uses: actions/checkout@v4 | |
| - uses: actions/setup-python@v5 | |
| with: | |
| python-version: "3.10" | |
| - name: Setup submodule | |
| run: | | |
| python -m pip install -r build_requirements.txt | |
| python -m pip install spin | |
| python spin setup-submodule | |
| - name: win_amd64 - install rtools | |
| run: | | |
| choco install rtools -y --no-progress --force --version=4.0.0.20220206 | |
| echo "c:\rtools40\ucrt64\bin;" >> $env:GITHUB_PATH | |
| if: ${{ runner.os == 'Windows' && env.IS_32_BIT == 'false' }} | |
| - name: Build wheels | |
| uses: pypa/[email protected] | |
| # Build all wheels here, apart from macosx_arm64, linux_aarch64 | |
| # cibuildwheel is currently unable to pass configuration flags to | |
| # CIBW_BUILD_FRONTEND https://github.com/pypa/cibuildwheel/issues/1227 | |
| # (pip/build). Cross compilation with meson requires an initial | |
| # configuration step to create a build directory. The subsequent wheel | |
| # build then needs to use that directory. This can be done with pip | |
| # using a command like: | |
| # python -m pip wheel --config-settings builddir=build . | |
| # if: >- | |
| # ( ! contains(matrix.os[2], 'arm64' ) ) | |
| env: | |
| CIBW_BUILD: ${{ matrix.python[0] }}-${{ matrix.os[1] }}* | |
| CIBW_ARCHS: ${{ matrix.os[2] }} | |
| CIBW_ENVIRONMENT_PASS_LINUX: RUNNER_OS | |
| - uses: actions/upload-artifact@v4 | |
| with: | |
| path: ./wheelhouse/ | |
| name: ${{ matrix.python[0] }}-${{ matrix.os[1] }} | |
| build-wheels-m1: | |
| name: Build wheels on Arm M1 with Python ${{ matrix.python[0] }} | |
| runs-on: macos-latest | |
| strategy: | |
| # Ensure that a wheel builder finishes even if another fails | |
| fail-fast: false | |
| matrix: | |
| python: [["cp39", "3.9"], ["cp310", "3.10"], ["cp311", "3.11"], ["cp312", "3.12"]] | |
| # python[0] is used to specify the python versions made by cibuildwheel | |
| steps: | |
| - name: Checkout code | |
| uses: actions/checkout@v4 | |
| - name: Set up Python | |
| uses: actions/setup-python@v5 | |
| with: | |
| python-version: "3.10" # Replace with the desired Python version | |
| - name: Install cibuildwheel dependencies | |
| run: | | |
| python -m pip install cibuildwheel | |
| python -m pip install -r build_requirements.txt | |
| python -m pip install spin | |
| python spin setup-submodule | |
| - name: Build wheels | |
| uses: pypa/[email protected] | |
| env: | |
| CIBW_BUILD: ${{ matrix.python[0] }}-macosx_arm64 | |
| CIBW_ARCHS_MACOS: arm64 | |
| - uses: actions/upload-artifact@v4 | |
| with: | |
| path: ./wheelhouse | |
| name: ${{ matrix.python[0] }}-arm | |
| # Build the source distribution under Linux | |
| build_sdist: | |
| name: Source distribution | |
| runs-on: ubuntu-latest | |
| steps: | |
| - name: Checkout scikit-tree | |
| uses: actions/checkout@v4 | |
| - name: Setup Python | |
| uses: actions/setup-python@v5 | |
| with: | |
| python-version: "3.10" # update once build dependencies are available | |
| - name: Build source distribution | |
| run: | | |
| python -m pip install -r build_requirements.txt | |
| python -m pip install spin | |
| python spin setup-submodule | |
| python -m build | |
| - name: Store artifacts | |
| uses: actions/upload-artifact@v4 | |
| with: | |
| path: dist/*.tar.gz | |
| - uses: actions/upload-artifact@v4 | |
| with: | |
| path: dist | |
| name: ${{ matrix.python[0] }}-${{ matrix.os[1] }} |