Code

Greengenes2 2022.10 Support#666

Code

Merged

d4straub merged 10 commits intonf-core:devnf-core/ampliseq:devfrom MatthewJM96:greengenes_2022MatthewJM96/ampliseq:greengenes_2022Copy head branch name to clipboardJan 12, 2024

+30-3

Commits

Commits on Nov 28, 2023

• Add greengenes2 2022.10 to qiime ref databases.

  

  Matthew Marshall

  committed
  d924110

  Copy full SHA for d924110

• Add greengenes2022 to acceptable qiime_ref_taxonomy values.

  

  Matthew Marshall

  committed
  1082841

  Copy full SHA for 1082841

• gzip does not operate on symbolic links unless forced or, as now, told to emit result to stdout.

  

  Matthew Marshall

  committed
  4612cd1

  Copy full SHA for 4612cd1

• Update usage.md.

  

  Matthew Marshall

  committed
  c230c22

  Copy full SHA for c230c22

• Merge remote-tracking branch 'upstream/dev' into greengenes_2022

  

  Matthew Marshall

  committed
  4e32672

  Copy full SHA for 4e32672

• Update CHANGELOG.md.

  

  Matthew Marshall

  committed
  1dd0d8e

  Copy full SHA for 1dd0d8e

• Add pull request link to changelog.

  

  Matthew Marshall

  committed
  850a603

  Copy full SHA for 850a603

Commits on Dec 21, 2023

• merge dev

  d4straub

  committed
  975e6d4

  Copy full SHA for 975e6d4

• Apply suggestions from code review

  d4straub

  authored
  815e62b

  Copy full SHA for 815e62b

Commits on Jan 11, 2024

• activate multi-cpu use in QIIME2_EXTRACT

  d4straub

  committed
  70b2e01

  Copy full SHA for 70b2e01