Fixed wrongly colored dots in report volcano

CHANGELOG.md

@@ -11,6 +11,7 @@ and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0
 
 ### Fixed
 
+- [[#342](https://github.com/nf-core/differentialabundance/pull/342)] - Fixed incorrectly colored dots in report volcano plots for logFC thresholds <1 ([@WackerO](https://github.com/WackerO), review by [@pinin4fjords](https://github.com/pinin4fjords))
 - [[#304](https://github.com/nf-core/differentialabundance/pull/304)] - Removed TXT file options from nextflow_schema where they are equivalent to TSV to make the input files clearer ([@WackerO](https://github.com/WackerO), review by [@pinin4fjords](https://github.com/pinin4fjords))
 - [[#299](https://github.com/nf-core/differentialabundance/pull/299)] - Add exclusions for 3.0.1 template update ([@pinin4fjords](https://github.com/pinin4fjords))
 - [[#289](https://github.com/nf-core/differentialabundance/pull/289)] - Fix missing ch_gene_sets default for gprofiler2 ([@WackerO](https://github.com/WackerO), review by [@pinin4fjords](https://github.com/pinin4fjords))

assets/differentialabundance_report.Rmd

@@ -833,7 +833,7 @@ for (i in 1:nrow(contrasts)){
         cat("\n##### ", pvt, " p values\n")
         pval_column <- p_value_types[[pvt]]
 
-        de_fc <- abs(full_de[[params$differential_fc_column]]) >= log2(params$differential_min_fold_change)
+        de_fc <- abs(full_de[[params$differential_fc_column]]) >= abs(log2(params$differential_min_fold_change))
         de_fc_label <- paste("abs(logFC) >=", log2(params$differential_min_fold_change))
 
         de_pval <- full_de[[pval_column]] <= p_value_thresholds[[pvt]]