I am currently working as a research assistant at the Institute of Neuropathology of the University of Freiburg. My research focuses on the intricate study of brain tumors, specifically gliomas and meningiomas, using cutting-edge single cell and spatial omics techniques.
R (Seurat, tidyverse) • Python (scanpy, seaborn, pandas, numpy) • Unix/Linux • Git • LaTeX
🧬 scRNA-seq • 📊 Bulk RNA-seq • 🔗 Multiome (ATAC+RNA) • 🏷️ CITE-seq • 🖼️ CODEX • Immune Repetoire (TCR/BCR)
🔗 Multiomics Integration • 🧭 Trajectory Inference • 🔮 Perturbation Prediction • 🔍 Spatial Analysis 🌐 Gene Regulatory Network Inference • 🧩 Ligand-Receptor Interaction • 📊 Copy Number Inference
📓 R Markdown / Jupyter Notebooks • 📦 Conda Environments