1.6.3

Release Notes

This release includes a new interface and improvements to existing interfaces.

Changes

• CI: Fix commit check (#744)
• CI: Extract pip pre checks into separate, skippable job (#743)
• FIX: Missing outputs in RobustAverage (#741)
• ENH: ReorientImage interface (#736)
• ENH: Add minimum_fs_version input to BIDSFreeSurferDir (#739)
• MNT: Pin traits < 6.4 (#738)
• MNT: Upgrade versioneer (#737)
• MAINT: Remove pins that broke prerelease tests (#735)

1.6.2

Bug-fix release in the 1.6.x series.

This release fixes a bug where BIDS data collection would fail if using session as a BIDS filter.

• FIX: Ensure we do not clobber entities from bids filters (#731)

1.6.1

Release Notes

Bug-fix release in the 1.6.x series.

This release allows downstream tools to use nitransforms 22.0.

Changes

• MNT: Relax nitransforms dependency by @effigies in #727

Full Changelog: 1.6.0...1.6.1

1.6.0

Release Notes

New feature release in the 1.6.x series. This series will support sMRIPrep 0.9, fMRIPrep 22.0., and nibabies 22.1.

Changes

• FIX: Address some reliability issues of the functional masking workflow (#714)
• FIX: Improve reliability of BOLD masking workflow (#712)
• FIX: Account for potential lists of lists in multi-echo cases (#719)
• ENH: Added MRtrix3 gradients to derivative path patterns (#724)
• ENH: Add T2starmap as a functional derivative (#720)
• MAINT: Replace distutils use, upgrade versioneer (#725)
• CI: Let datalad handle git-annex installation (#721)
• CI: Bump environment cache version (#717)
• CI: Fallback to maintenance branch first (#716)

Full Changelog: 1.5.4...1.6.0

1.4.9

Release Notes

This release includes improvements to the reliability of the BOLD masking workflow,
as well as an fMRIPrep bug-fix when reusing multi-echo anatomicals.

Changes

• FIX: Account for potential lists of lists in multi-echo cases (#719)
• FIX: Improve reliability of BOLD masking workflow (#712)

1.4.8

Release Notes

This change enables a bug-fix in sdcflows where images with slightly
different affines were unable to be concatenated for use with TOPUP.

Changes

• ENH: Add affine_tolerance flag to MergeSeries (#706)

1.4.7

Release Notes

Bug-fix release in the 1.4.x series.

Changes

• FIX: Use copy function that does not preserve mtime when creating fsaverage directories (#703)
• FIX: Add unlink() with missing_ok for Python 3.7 (#695)
• ENH: Select magnitude images in collect_data for BIDS 1.5.0 (#594)
• CI: Install package across Python versions and run pytest (#697)

Full Changelog: 1.4.6...1.4.7

1.3.7

What's Changed

• FIX: Use copy function that does not preserve mtime when creating fsaverage directories by @effigies in #703

Full Changelog: 1.3.6...1.3.7

1.5.2

Release Notes

Bug-fix release in 1.5.x series.

Changes

• FIX: Add unlink() with missing_ok for Python 3.7 by @effigies in #695

Full Changelog: 1.5.1...1.5.2

1.5.1

What's Changed

• ENH: Reorder within-segment rows of carpetplot with hierarchical clustering by @celprov in #686
• ENH: Initiate a module of nipype interfaces for mathematical morphology by @celprov in #651
• ENH: Refactor carpetplot reasigning responsibilities by @oesteban in #687
• ENH: Miscellaneous improvements to carpetplot by @oesteban in #688
• FIX: Error handling the segmentation in NIfTI extraction by @oesteban in #689
• ENH: Add a legend to carpet plots with more than one segment by @oesteban in #690
• FIX: Smarter decision to remap input segmentation to carpetplot by @oesteban in #691
• DOC: Fix doc builds in maint/1.3.x by @effigies in #692
• FIX: Unlink destination files before saving derivative by @effigies in #683
• FIX: Set pixdim[4] to match RepetitionTime by @effigies in #679

New Contributors

• @celprov made their first contribution in #651

Full Changelog: 1.5.0...1.5.1