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MAINT: Test against latest NumPy #221

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merged 14 commits into from
Jun 14, 2024
Merged

MAINT: Test against latest NumPy #221

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a159e81
MAINT: Test against latest NumPy
larsoner Jun 12, 2024
d52cc5a
FIX: Failing successfully
larsoner Jun 12, 2024
eb29943
FIX: Fixes
larsoner Jun 12, 2024
8b8202f
FIX: Try again [build wheels]
larsoner Jun 12, 2024
73c6c13
FIX: Try again [build wheels]
larsoner Jun 12, 2024
4ff8ccd
FIX: Try again [build wheels]
larsoner Jun 12, 2024
3454248
Apply suggestions from code review
larsoner Jun 12, 2024
74c2723
FIX: cov
larsoner Jun 12, 2024
a5eccec
TST: Wheels, too [build wheels]
larsoner Jun 12, 2024
1a4c5cc
FIX: Put back [build wheels]
larsoner Jun 12, 2024
6645dba
FIX: Test
larsoner Jun 12, 2024
e7ba859
TST: Wheels too [build wheels]
larsoner Jun 12, 2024
5f5fae5
FIX: Seed directly [build wheels]
larsoner Jun 12, 2024
3e65a12
FIX: See why [build wheels]
larsoner Jun 12, 2024
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6 changes: 6 additions & 0 deletions .github/workflows/test.yml
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Original file line number Diff line number Diff line change
Expand Up @@ -19,8 +19,10 @@ jobs:
test:

runs-on: ubuntu-latest
continue-on-error: true
strategy:
matrix:
# We test NumPy dev on 3.11
python-version: ['3.8', '3.9', '3.10', '3.11', '3.12']
requires: ['requirements.txt']
include:
Expand All @@ -37,9 +39,13 @@ jobs:
allow-prereleases: true
- name: Install
run: |
set -eo pipefail
python -m pip install --upgrade pip
python -m pip install -r ${{ matrix.requires }}
python -m pip install -r requirements-dev.txt
if [[ "${{ matrix.python-version }}" == "3.11" ]]; then
python -m pip install --only-binary numpy --pre --extra-index-url https://pypi.anaconda.org/scientific-python-nightly-wheels/simple "numpy>=2.1.0.dev0"
fi
python -m pip install .
- name: Lint
run: |
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2 changes: 1 addition & 1 deletion nitime/algorithms/event_related.py
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Expand Up @@ -10,7 +10,7 @@


def fir(timeseries, design):
"""
r"""
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Takes care of

  nitime/algorithms/event_related.py:13: SyntaxWarning: invalid escape sequence '\h'

Calculate the FIR (finite impulse response) HRF, according to [Burock2000]_

Parameters
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6 changes: 2 additions & 4 deletions nitime/algorithms/tests/test_spectral.py
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Expand Up @@ -246,8 +246,7 @@ def test_mtm_lin_combo():
mtm_cross = tsa.mtm_cross_spectrum(
spec1, spec2, (weights[0], weights[1]), sides=sides
)
npt.assert_(mtm_cross.dtype in np.sctypes['complex'],
'Wrong dtype for crossspectrum')
assert mtm_cross.dtype == np.complex128, 'Wrong dtype for crossspectrum'
npt.assert_(len(mtm_cross) == 51,
'Wrong length for halfband spectrum')
sides = 'twosided'
Expand All @@ -260,8 +259,7 @@ def test_mtm_lin_combo():
mtm_auto = tsa.mtm_cross_spectrum(
spec1, spec1, weights[0], sides=sides
)
npt.assert_(mtm_auto.dtype in np.sctypes['float'],
'Wrong dtype for autospectrum')
assert mtm_auto.dtype == np.float64, 'Wrong dtype for autospectrum'
npt.assert_(len(mtm_auto) == 51,
'Wrong length for halfband spectrum')
sides = 'twosided'
Expand Down
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