Load multidimensional image stacks using lazy loading.
A simple class to load OctopusLite data from a directory. Caches data once
it is loaded to prevent excessive I/O to the data server. Can directly
address different channels using the `Channels` enumerator.
Usage
-----
>>> from octopuslite import DaskOctopus, MetadataParser
>>> images = DaskOctopus(
path = '/path/to/your/data/',
crop = (1200,1600),
transforms = 'path/to/transform_array.npy',
remove_background = True,
parser = MetadataParser.OCTOPUS,
)
>>> gfp = images["GFP"]
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reader for octopuslite data
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nthndy/octopuslite-reader
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- Python 100.0%