Add query for specimen subclasses in obi-edit

obi-ontology · Nov 4, 2024 · 307a21a · 307a21a
1 parent efae02e
commit 307a21a
Showing 1 changed file with 11 additions and 0 deletions.
diff --git a/src/sparql/specimen-violation-modules.rq b/src/sparql/specimen-violation-modules.rq
@@ -0,0 +1,11 @@
+# 'specimen' should have no asserted children in obi-edit.owl
+# Any descendant of specimen that has a label is asserted in obi-edit.owl
+
+PREFIX obo:  <http://purl.obolibrary.org/obo/>
+PREFIX rdfs: <http://www.w3.org/2000/01/rdf-schema#>
+
+SELECT ?s WHERE {
+	?s rdfs:subClassOf* obo:OBI_0100051 ;
+	   rdfs:label ?label .
+	FILTER (str(?s) != "http://purl.obolibrary.org/obo/OBI_0100051")
+}