fixing ref processing in the bytes.eo

.github/workflows/telegram.yml

@@ -36,30 +36,33 @@ jobs:
       - uses: djdefi/cloc-action@7
         with:
           options: --json --report-file=cloc.json
-      - run: sudo apt-get update && sudo apt-get install --yes jq
+      - run: sudo apt-get update && sudo apt-get install --yes jq bc
       - uses: ruby/setup-ruby@v1
         with:
           ruby-version: 3.2
       - run: gem install hoc
       - run: |
           git fetch --tag
           (
-            printf 'Good news, we have just published the %dth release ' \
+            printf 'Good news, we have just published the %d-th release ' \
               "$(git tag | wc -l | xargs)"
             printf 'of [EO-to-Java compiler](https://github.com/objectionary/eo): '
             printf '[%s](https://github.com/objectionary/eo/releases/tag/%s). ' \
               "${{github.ref_name}}" "${{github.ref_name}}"
-            printf 'At the moment, there are %d lines-of code ' \
-              "$(jq '.SUM.code' <cloc.json)"
-            printf 'and %d [hits-of-code](https://www.yegor256.com/2014/11/14/hits-of-code.html) ' \
-              "$(hoc .)"
-            printf 'in the [repository](https://github.com/objectionary/eo) '
-            printf '(%d Git commits total). ' \
+            printf 'At the moment, there are %dK lines-of code ' \
+              "$(echo "$(jq '.SUM.code' <cloc.json)" / 1000 | bc)"
+            printf 'and %dK [hits-of-code](https://www.yegor256.com/2014/11/14/hits-of-code.html) ' \
+              "$(echo "$(hoc .)" / 1000 | bc)"
+            printf 'in the [repository](https://github.com/objectionary/eo) on GitHub '
+            printf '(%d commits total). ' \
               "$(git rev-list --count master)"
-            printf 'There are %d objects and %d atoms in the runtime. ' \
+            printf 'Currently, there are %d objects and %d atoms ' \
               "$(find eo-runtime/src/main/eo -name '*.eo' | wc -l)" \
               "$(find eo-runtime/src/main/java/EOorg -name 'EO*.java' | wc -l)"
-            printf 'You are welcome to give it a try!'
+            printf 'in the [eo-runtime](https://github.com/objectionary/eo/tree/master/eo-runtime) module. '
+            printf 'There are %d open issues in [our backlog](https://github.com/objectionary/eo/issues), ' \
+              "$(curl --silent 'https://api.github.com/repos/objectionary/eo/issues?state=open&per_page=100' | jq length)"
+            printf 'please, help us fix them (take those with the "help wanted" badge first).'
           ) > message.md
       - uses: appleboy/telegram-action@master
         with:

eo-maven-plugin/src/main/java/org/eolang/maven/BinarizeParse.java

@@ -45,7 +45,7 @@
 import org.eolang.maven.rust.Names;
 import org.eolang.maven.rust.RustNode;
 import org.eolang.maven.tojos.ForeignTojo;
-import org.eolang.parser.ParsingTrain;
+import org.eolang.parser.TrParsing;
 
 /**
  * Parse rust inserts.
@@ -67,7 +67,7 @@ public final class BinarizeParse {
      * appropriate XSL transformation.
      */
     private static final Train<Shift> TRAIN = new TrBulk<>(
-        new TrClasspath<>(new ParsingTrain().empty()),
+        new TrClasspath<>(new TrParsing().empty()),
         Arrays.asList("/org/eolang/maven/add_rust/add_rust.xsl")
     ).back().back();
 

eo-maven-plugin/src/main/java/org/eolang/maven/OptimizeMojo.java

@@ -43,7 +43,7 @@
 import org.eolang.maven.optimization.Optimization;
 import org.eolang.maven.tojos.ForeignTojo;
 import org.eolang.maven.tojos.TojoHash;
-import org.eolang.parser.ParsingTrain;
+import org.eolang.parser.TrParsing;
 
 /**
  * Optimize XML files.
@@ -143,7 +143,7 @@ private int optimized(final ForeignTojo tojo, final Optimization optimization)
      */
     private Optimization optimization() {
         final Optimization opt;
-        final Train<Shift> train = this.measured(new ParsingTrain());
+        final Train<Shift> train = this.measured(new TrParsing());
         if (this.trackOptimizationSteps) {
             opt = new OptSpy(
                 train,

eo-maven-plugin/src/main/java/org/eolang/maven/PhiMojo.java

@@ -28,7 +28,6 @@
 import com.jcabi.xml.XMLDocument;
 import com.yegor256.xsline.Shift;
 import com.yegor256.xsline.TrClasspath;
-import com.yegor256.xsline.TrDefault;
 import com.yegor256.xsline.TrJoined;
 import com.yegor256.xsline.Train;
 import com.yegor256.xsline.Xsline;
@@ -48,8 +47,8 @@
 import org.cactoos.text.TextOf;
 import org.eolang.maven.footprint.Saved;
 import org.eolang.maven.util.Walk;
-import org.eolang.parser.ParsingTrain;
 import org.eolang.parser.Schema;
+import org.eolang.parser.TrParsing;
 
 /**
  * Read XMIR files and translate them to the phi-calculus expression.
@@ -219,9 +218,9 @@ private int translate(final Path xmir, final Xsline xsline, final int position,
     private Train<Shift> train() {
         final Train<Shift> train;
         if (this.phiOptimize) {
-            train = new ParsingTrain();
+            train = new TrParsing();
         } else {
-            train = new TrDefault<>();
+            train = new com.yegor256.xsline.TrDefault<>();
         }
         final List<String> dependent = new ListOf<>(
             "/org/eolang/parser/critical-errors/duplicate-names.xsl",

eo-maven-plugin/src/main/java/org/eolang/maven/UnphiMojo.java

@@ -49,6 +49,7 @@
 import org.eolang.maven.util.Home;
 import org.eolang.maven.util.Walk;
 import org.eolang.parser.PhiSyntax;
+import org.eolang.parser.TrStepped;
 import org.xembly.Directive;
 import org.xembly.Directives;
 
@@ -65,11 +66,13 @@ public final class UnphiMojo extends SafeMojo {
     /**
      * Unphi transformations.
      */
-    private static final Train<Shift> TRANSFORMATIONS = new TrClasspath<>(
-        "/org/eolang/maven/unphi/wrap-bytes.xsl",
-        "/org/eolang/parser/wrap-method-calls.xsl",
-        "/org/eolang/maven/unphi/atoms-with-bound-attrs.xsl"
-    ).back();
+    private static final Train<Shift> TRANSFORMATIONS = new TrStepped(
+        new TrClasspath<>(
+            "/org/eolang/maven/unphi/wrap-bytes.xsl",
+            "/org/eolang/parser/wrap-method-calls.xsl",
+            "/org/eolang/maven/unphi/atoms-with-bound-attrs.xsl"
+        ).back()
+    );
 
     /**
      * The directory where to take phi files for parsing from.

eo-maven-plugin/src/test/java/org/eolang/maven/OptimizeMojoTest.java

@@ -80,7 +80,6 @@ void optimizesSimpleObject(@Mktmp final Path temp) throws Exception {
                     f.files().file("target/eo/2-optimize/foo.xmir").exists(),
                     Matchers.is(true)
                 );
-                f.files().show();
             }
         );
     }

eo-maven-plugin/src/test/java/org/eolang/maven/PhiMojoTest.java

@@ -74,11 +74,40 @@ void convertsSimpleObjectToPhi(@Mktmp final Path temp,
                     f.files().file("target/eo/phi/foo.phi").exists(),
                     Matchers.is(true)
                 );
-                f.files().show();
             }
         );
     }
 
+    @Test
+    void convertsObjectWithSystemType(@Mktmp final Path temp) throws Exception {
+        new Farea(temp).together(
+            f -> {
+                f.clean();
+                f.files().file("src/main/eo/org/eolang/bytes.eo").write(
+                    String.join(
+                        "\n",
+                        "+package org.eolang",
+                        "",
+                        "# In this program, we define a 'system' object, similar",
+                        "# to how it is defined in org.eolang package, trying to",
+                        "# reproduce the error.",
+                        "[] > bytes",
+                        "  $.eq 01- > yes",
+                        ""
+                    ).getBytes()
+                );
+                f.build().plugins().appendItself();
+                f.exec("eo:register", "eo:parse", "eo:optimize");
+                f.exec("eo:xmir-to-phi");
+            }
+        );
+        MatcherAssert.assertThat(
+            "the .phi file is generated",
+            temp.resolve("target/eo/phi/org/eolang/bytes.phi").toFile().exists(),
+            Matchers.is(true)
+        );
+    }
+
     @Test
     void createsFiles(@Mktmp final Path temp) throws Exception {
         MatcherAssert.assertThat(

eo-maven-plugin/src/test/java/org/eolang/maven/PrintMojoTest.java

@@ -76,7 +76,6 @@ void printsSimpleObject(@Mktmp final Path temp) throws Exception {
                     f.files().file("target/generated-sources/eo/foo.eo").exists(),
                     Matchers.is(true)
                 );
-                f.files().show();
             }
         );
     }

eo-maven-plugin/src/test/java/org/eolang/maven/SodgMojoTest.java

@@ -78,13 +78,11 @@ void convertsSimpleObjectToGraph(@Mktmp final Path temp) throws Exception {
                     .execution()
                     .goals("register", "parse", "optimize", "shake", "sodg");
                 f.exec("compile");
-                f.files().show();
                 MatcherAssert.assertThat(
                     "the .sodg file is generated",
                     f.files().file("target/eo/sodg/foo.sodg").exists(),
                     Matchers.is(true)
                 );
-                f.files().show();
             }
         );
     }

eo-maven-plugin/src/test/java/org/eolang/maven/UnphiMojoTest.java

@@ -165,16 +165,15 @@ void checksUnphiPacks(final String pack, @Mktmp final Path temp) throws Exceptio
     void convertsToXmirAndBack(final String pack, @Mktmp final Path temp) throws Exception {
         final Map<String, Object> map = new Yaml().load(pack);
         if (map.get("skip") != null) {
-            Assumptions.abort(
-                String.format("%s is not ready", pack)
-            );
+            Assumptions.abort(String.format("%s is not ready", pack));
         }
         final String phi = map.get("phi").toString();
         final String main = "target/phi/main.phi";
         final Path path = Paths.get(main);
         new HmBase(temp).save(phi, path);
         final long saved = temp.resolve(path).toFile().lastModified();
-        final FakeMaven maven = new FakeMaven(temp).execute(UnphiMojo.class);
+        final FakeMaven maven = new FakeMaven(temp)
+            .execute(UnphiMojo.class);
         maven.foreignTojos().add("name")
             .withXmir(temp.resolve(String.format("target/%s/main.xmir", ParseMojo.DIR)));
         final Path result = maven
@@ -189,10 +188,8 @@ void convertsToXmirAndBack(final String pack, @Mktmp final Path temp) throws Exc
         );
         MatcherAssert.assertThat(
             "Origin phi should equal to phi got from \"unphied\" xmir, but it isn't",
-            phi,
-            Matchers.equalTo(
-                new TextOf(result).asString()
-            )
+            new TextOf(result).asString(),
+            Matchers.equalTo(phi)
         );
     }
 

eo-parser/src/main/java/org/eolang/parser/CheckPack.java

@@ -69,7 +69,7 @@ public Collection<String> failures() throws IOException {
         final Map<String, Object> map = yaml.load(this.script);
         final String src = map.get("eo").toString();
         final Iterable<String> xsls = (Iterable<String>) map.get("xsls");
-        Train<Shift> train = new ParsingTrain();
+        Train<Shift> train = new TrParsing();
         if (xsls != null) {
             if (!map.containsKey("defaults")) {
                 train = train.empty();