New GOBP and GOMF-based patterns

src/patterns/dosdp-dev/abnormallyDisruptedBiologicalProcess.yaml

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+pattern_name: abnormallyDisruptedBiologicalProcess
+pattern_iri: http://purl.obolibrary.org/obo/upheno/patterns-dev/abnormallyDisruptedBiologicalProcess.yaml
+description: "An interruption of a biological process of its normal course, such as disrupted plasminogen activation."
+
+contributors:
+  - https://orcid.org/0000-0002-9611-1279
+
+classes:
+  disrupted: PATO:0001507
+  abnormal: PATO:0000460
+  biological_process: GO:0008150
+
+relations:
+  inheres_in: RO:0000052
+  has_modifier: RO:0002573
+  has_part: BFO:0000051
+
+annotationProperties:
+  exact_synonym: oio:hasExactSynonym
+
+vars:
+  biological_process: "'biological_process'"
+
+name:
+  text: "disrupted %s"
+  vars:
+   - biological_process
+
+def:
+  text: "Disrupted %s."
+  vars:
+    - biological_process
+
+equivalentTo:
+  text: "'has_part' some ('disrupted' and ('inheres_in' some %s) and ('has_modifier' some 'abnormal'))"
+  vars:
+    - biological_process

src/patterns/dosdp-dev/mislocalisedBiologicalProcess.yaml

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+pattern_name: mislocalisedBiologicalProcess
+pattern_iri: http://purl.obolibrary.org/obo/upheno/patterns-dev/mislocalisedBiologicalProcess.yaml
+description: "Abnormal anatomic location of a biological process, such as an immune response."
+
+contributors:
+  - https://orcid.org/0000-0002-9611-1279
+
+classes:
+  mislocalised: PATO:0000628
+  abnormal: PATO:0000460
+  biological_process: GO:0008150
+
+relations:
+  inheres_in: RO:0000052
+  has_modifier: RO:0002573
+  has_part: BFO:0000051
+
+annotationProperties:
+  exact_synonym: oio:hasExactSynonym
+
+vars:
+  biological_process: "'biological_process'"
+
+name:
+  text: "mislocalised %s"
+  vars:
+   - biological_process
+
+def:
+  text: "Mislocalised %s."
+  vars:
+    - biological_process
+
+equivalentTo:
+  text: "'has_part' some ('mislocalised' and ('inheres_in' some %s) and ('has_modifier' some 'abnormal'))"
+  vars:
+    - biological_process

src/patterns/dosdp-dev/mislocalisedMolecularFunction.yaml

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+pattern_name: mislocalisedMolecularFunction
+pattern_iri: http://purl.obolibrary.org/obo/upheno/patterns-dev/mislocalisedMolecularFunction.yaml
+description: "Abnormal cellular location of a molecular function, such as ribosome biogenesis."
+
+contributors:
+  - https://orcid.org/0000-0002-9611-1279
+
+classes:
+  mislocalised: PATO:0000628
+  abnormal: PATO:0000460
+  molecular function: GO:0003674
+
+relations:
+  inheres_in: RO:0000052
+  has_modifier: RO:0002573
+  has_part: BFO:0000051
+
+annotationProperties:
+  exact_synonym: oio:hasExactSynonym
+
+vars:
+  molecular_function: "'molecular function'"
+
+name:
+  text: "mislocalised %s"
+  vars:
+   - molecular_function
+
+def:
+  text: "Mislocalised %s."
+  vars:
+    - molecular_function
+
+equivalentTo:
+  text: "'has_part' some ('mislocalised' and ('inheres_in' some %s) and ('has_modifier' some 'abnormal'))"
+  vars:
+    - molecular_function