Adjust run_model() to only require values relative to $k$ area
#481
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Function is only called in one place and is only two lines.
Remove use of temporary cache. The function is only used to constrain initial covers to realistic values once at start of simulation. If any adjustments are made we should throw a warning...
Simplification as values are now relative to `k` area
Explanatory comments
where `k` is the locations coral carrying capacity.
where `C` refers to coral
sites -> locations
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As in title.
Note: initial coral covers are still being converted from values relative to absolute area.
Part of #480 (Current item 2 - " Scenario running methods to be refactored to expect only values relative to area")