Merge pull request #2480 from opencb/TASK-5610 #1073
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Build Java app
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Annotations
200 errors
|
AlignmentAnalysisTest.testReadOnlyAlignmentIndex[hadoop]:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/alignment/AlignmentAnalysisTest.java#L333
Missing study when computing alignment index
|
|
AlignmentAnalysisTest.testNonReadOnlyCoverageIndex[hadoop]:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/alignment/AlignmentAnalysisTest.java#L361
Missing study when computing alignment index
|
|
AlignmentAnalysisTest.testReadOnlyCoverageIndex[hadoop]:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/alignment/AlignmentAnalysisTest.java#L402
Missing study when computing alignment index
|
|
AlignmentAnalysisTest.testNonReadOnlyAlignmentIndex[hadoop]:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/alignment/AlignmentAnalysisTest.java#L304
Missing study when computing alignment index
|
|
ExomiserInterpretationAnalysisTest.trioSingleExomiserAnalysis:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/clinical/exomiser/ExomiserInterpretationAnalysisTest.java#L198
org.opencb.opencga.catalog.exceptions.ResourceException: Resource 'EXOMISER_14_0_0_HG38' is not fetched yet (file '/opt/opencga/analysis/resources/exomiser/14.0.0/2402_hg38' is missing). Please fetch it first.
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|
ExomiserInterpretationAnalysisTest.familyExomiserAnalysis:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/clinical/exomiser/ExomiserInterpretationAnalysisTest.java#L149
org.opencb.opencga.catalog.exceptions.ResourceException: Resource 'EXOMISER_14_0_0_HG38' is not fetched yet (file '/opt/opencga/analysis/resources/exomiser/14.0.0/2402_hg38' is missing). Please fetch it first.
|
|
ExomiserInterpretationAnalysisTest.singleExomiserAnalysis:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/clinical/exomiser/ExomiserInterpretationAnalysisTest.java#L102
org.opencb.opencga.catalog.exceptions.ResourceException: Resource 'EXOMISER_14_0_0_HG38' is not fetched yet (file '/opt/opencga/analysis/resources/exomiser/14.0.0/2402_hg38' is missing). Please fetch it first.
|
|
VariantManagerFetchTest.testQueryProject:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantManagerFetchTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
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|
VariantManagerFetchTest.testQueryAnonymousWithoutPermissions:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantManagerFetchTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
|
|
VariantManagerFetchTest.testQueryAnonymousOnlyAggregated:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantManagerFetchTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
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|
VariantManagerFetchTest.testQueryAnonymousOneStudyPermissionsIncludeBoth:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantManagerFetchTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
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|
VariantManagerFetchTest.testQueryAnonymousTwoStudiesPermissions:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantManagerFetchTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
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|
VariantManagerFetchTest.testCount:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantManagerFetchTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
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|
VariantManagerFetchTest.testQuery:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantManagerFetchTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
|
|
VariantManagerFetchTest.testCheckSamplePermissionNonIndexedSamples:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantManagerFetchTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
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|
VariantManagerFetchTest.testQueryExcludeSamples:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantManagerFetchTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
|
|
VariantManagerFetchTest.testQueryAnonymousViewSampleVariantsStudyLevel:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantManagerFetchTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
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|
VariantManagerFetchTest.testQueryExcludeStudies:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantManagerFetchTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
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|
VariantManagerFetchTest.testQueryAnonymousViewSampleVariants:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantManagerFetchTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
|
|
VariantManagerFetchTest.testQueryAnonymousInMembersWithoutPermissions:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantManagerFetchTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
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|
VariantManagerFetchTest.testQueryAnonymousViewSampleVariantsWithoutAggregatedVariantsFail1:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantManagerFetchTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
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|
VariantManagerFetchTest.testQueryAnonymousViewSampleVariantsWithoutAggregatedVariantsFail2:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantManagerFetchTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
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|
VariantManagerFetchTest.testQueryAnonymousOneStudyPermissions:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantManagerFetchTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
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|
VariantManagerFetchTest.testQueryAnonymousViewSampleVariantsWithoutAggregatedVariants:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantManagerFetchTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
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|
VariantOperationsTest.testSetup[dummy]:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantOperationsTest.java#L336
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.VariantOperationsTest.testSetup(VariantOperationsTest.java:336)
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|
VariantOperationsTest.testSetup[hadoop]:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantOperationsTest.java#L336
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.VariantOperationsTest.testSetup(VariantOperationsTest.java:336)
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|
VariantStorageManagerTest.testConfigureSampleIndex:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantStorageManagerTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
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|
VariantStorageManagerTest.testGetIndexedSamples:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantStorageManagerTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
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VariantStorageManagerTest.testConfigure:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantStorageManagerTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
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|
VariantStorageManagerTest.testConfigureProtectedValues:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantStorageManagerTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
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|
AnalysisFileIndexerAggregatedTest.testIndexWithAggregatedStats:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/operations/AnalysisFileIndexerAggregatedTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
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AnnotationVariantStorageTest.testAnnotateDefault:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/operations/AnnotationVariantStorageTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
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|
AnnotationVariantStorageTest.testAnnotateRegion:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/operations/AnnotationVariantStorageTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
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|
AnnotationVariantStorageTest.testAnnotateCreateAndLoad:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/operations/AnnotationVariantStorageTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
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|
AnnotationVariantStorageTest.testAnnotateProject:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/operations/AnnotationVariantStorageTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
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|
AnnotationVariantStorageTest.testCustomAnnotation:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/operations/AnnotationVariantStorageTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
|
|
AnnotationVariantStorageTest.testAnnotateCreateAndLoadExternal:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/operations/AnnotationVariantStorageTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
|
|
PlatinumFileIndexerTest.testBatchFromDirectory:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/operations/PlatinumFileIndexerTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
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|
PlatinumFileIndexerTest.testBatch:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/operations/PlatinumFileIndexerTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
|
|
PlatinumFileIndexerTest.testLauncher:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/operations/PlatinumFileIndexerTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
|
|
PlatinumFileIndexerTest.testByStepsMultiRelease:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/operations/PlatinumFileIndexerTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
|
|
PlatinumFileIndexerTest.testBySteps:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/operations/PlatinumFileIndexerTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
|
|
PlatinumFileIndexerTest.testIndexFamily:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/operations/PlatinumFileIndexerTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
|
|
PlatinumFileIndexerTest.testBatchBySteps:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/operations/PlatinumFileIndexerTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
|
|
RemoveVariantsTest.testLoadAndRemoveOne:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/operations/RemoveVariantsTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
|
|
RemoveVariantsTest.testLoadAndRemoveDifferentChromosomes:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/operations/RemoveVariantsTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
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RemoveVariantsTest.testLoadAndRemoveForce:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/operations/RemoveVariantsTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
|
|
RemoveVariantsTest.testLoadAndRemoveStudy:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/operations/RemoveVariantsTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
|
|
RemoveVariantsTest.testLoadAndRemoveMany:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/operations/RemoveVariantsTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
|
|
RemoveVariantsTest.testLoadAndRemoveOneWithOtherLoaded:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/operations/RemoveVariantsTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
|
|
AlignmentAnalysisTest.testReadOnlyAlignmentIndex[hadoop]:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/alignment/AlignmentAnalysisTest.java#L333
Missing study when computing alignment index
|
|
AlignmentAnalysisTest.testNonReadOnlyCoverageIndex[hadoop]:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/alignment/AlignmentAnalysisTest.java#L361
Missing study when computing alignment index
|
|
AlignmentAnalysisTest.testReadOnlyCoverageIndex[hadoop]:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/alignment/AlignmentAnalysisTest.java#L402
Missing study when computing alignment index
|
|
AlignmentAnalysisTest.testNonReadOnlyAlignmentIndex[hadoop]:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/alignment/AlignmentAnalysisTest.java#L304
Missing study when computing alignment index
|
|
ExomiserInterpretationAnalysisTest.trioSingleExomiserAnalysis:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/clinical/exomiser/ExomiserInterpretationAnalysisTest.java#L198
org.opencb.opencga.catalog.exceptions.ResourceException: Resource 'EXOMISER_14_0_0_HG38' is not fetched yet (file '/opt/opencga/analysis/resources/exomiser/14.0.0/2402_hg38' is missing). Please fetch it first.
|
|
ExomiserInterpretationAnalysisTest.familyExomiserAnalysis:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/clinical/exomiser/ExomiserInterpretationAnalysisTest.java#L149
org.opencb.opencga.catalog.exceptions.ResourceException: Resource 'EXOMISER_14_0_0_HG38' is not fetched yet (file '/opt/opencga/analysis/resources/exomiser/14.0.0/2402_hg38' is missing). Please fetch it first.
|
|
ExomiserInterpretationAnalysisTest.singleExomiserAnalysis:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/clinical/exomiser/ExomiserInterpretationAnalysisTest.java#L102
org.opencb.opencga.catalog.exceptions.ResourceException: Resource 'EXOMISER_14_0_0_HG38' is not fetched yet (file '/opt/opencga/analysis/resources/exomiser/14.0.0/2402_hg38' is missing). Please fetch it first.
|
|
VariantManagerFetchTest.testQueryProject:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantManagerFetchTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
|
|
VariantManagerFetchTest.testQueryAnonymousWithoutPermissions:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantManagerFetchTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
|
|
VariantManagerFetchTest.testQueryAnonymousOnlyAggregated:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantManagerFetchTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
|
|
VariantManagerFetchTest.testQueryAnonymousOneStudyPermissionsIncludeBoth:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantManagerFetchTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
|
|
VariantManagerFetchTest.testQueryAnonymousTwoStudiesPermissions:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantManagerFetchTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
|
|
VariantManagerFetchTest.testCount:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantManagerFetchTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
|
|
VariantManagerFetchTest.testQuery:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantManagerFetchTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
|
|
VariantManagerFetchTest.testCheckSamplePermissionNonIndexedSamples:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantManagerFetchTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
|
|
VariantManagerFetchTest.testQueryExcludeSamples:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantManagerFetchTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
|
|
VariantManagerFetchTest.testQueryAnonymousViewSampleVariantsStudyLevel:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantManagerFetchTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
|
|
VariantManagerFetchTest.testQueryExcludeStudies:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantManagerFetchTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
|
|
VariantManagerFetchTest.testQueryAnonymousViewSampleVariants:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantManagerFetchTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
|
|
VariantManagerFetchTest.testQueryAnonymousInMembersWithoutPermissions:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantManagerFetchTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
|
|
VariantManagerFetchTest.testQueryAnonymousViewSampleVariantsWithoutAggregatedVariantsFail1:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantManagerFetchTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
|
|
VariantManagerFetchTest.testQueryAnonymousViewSampleVariantsWithoutAggregatedVariantsFail2:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantManagerFetchTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
|
|
VariantManagerFetchTest.testQueryAnonymousOneStudyPermissions:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantManagerFetchTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
|
|
VariantManagerFetchTest.testQueryAnonymousViewSampleVariantsWithoutAggregatedVariants:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantManagerFetchTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
|
|
VariantOperationsTest.testSetup[dummy]:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantOperationsTest.java#L336
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.VariantOperationsTest.testSetup(VariantOperationsTest.java:336)
|
|
VariantOperationsTest.testSetup[hadoop]:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantOperationsTest.java#L336
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.VariantOperationsTest.testSetup(VariantOperationsTest.java:336)
|
|
VariantStorageManagerTest.testConfigureSampleIndex:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantStorageManagerTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
|
|
VariantStorageManagerTest.testGetIndexedSamples:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantStorageManagerTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
|
|
VariantStorageManagerTest.testConfigure:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantStorageManagerTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
|
|
VariantStorageManagerTest.testConfigureProtectedValues:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantStorageManagerTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
|
|
AnalysisFileIndexerAggregatedTest.testIndexWithAggregatedStats:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/operations/AnalysisFileIndexerAggregatedTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
|
|
AnnotationVariantStorageTest.testAnnotateDefault:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/operations/AnnotationVariantStorageTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
|
|
AnnotationVariantStorageTest.testAnnotateRegion:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/operations/AnnotationVariantStorageTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
|
|
AnnotationVariantStorageTest.testAnnotateCreateAndLoad:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/operations/AnnotationVariantStorageTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
|
|
AnnotationVariantStorageTest.testAnnotateProject:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/operations/AnnotationVariantStorageTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
|
|
AnnotationVariantStorageTest.testCustomAnnotation:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/operations/AnnotationVariantStorageTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
|
|
AnnotationVariantStorageTest.testAnnotateCreateAndLoadExternal:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/operations/AnnotationVariantStorageTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
|
|
PlatinumFileIndexerTest.testBatchFromDirectory:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/operations/PlatinumFileIndexerTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
|
|
PlatinumFileIndexerTest.testBatch:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/operations/PlatinumFileIndexerTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
|
|
PlatinumFileIndexerTest.testLauncher:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/operations/PlatinumFileIndexerTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
|
|
PlatinumFileIndexerTest.testByStepsMultiRelease:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/operations/PlatinumFileIndexerTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
|
|
PlatinumFileIndexerTest.testBySteps:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/operations/PlatinumFileIndexerTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
|
|
PlatinumFileIndexerTest.testIndexFamily:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/operations/PlatinumFileIndexerTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
|
|
PlatinumFileIndexerTest.testBatchBySteps:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/operations/PlatinumFileIndexerTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
|
|
RemoveVariantsTest.testLoadAndRemoveOne:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/operations/RemoveVariantsTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
|
|
RemoveVariantsTest.testLoadAndRemoveDifferentChromosomes:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/operations/RemoveVariantsTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
|
|
RemoveVariantsTest.testLoadAndRemoveForce:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/operations/RemoveVariantsTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
|
|
RemoveVariantsTest.testLoadAndRemoveStudy:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/operations/RemoveVariantsTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
|
|
RemoveVariantsTest.testLoadAndRemoveMany:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/operations/RemoveVariantsTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
|
|
RemoveVariantsTest.testLoadAndRemoveOneWithOtherLoaded:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/operations/RemoveVariantsTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
|
|
AlignmentAnalysisTest.testReadOnlyAlignmentIndex[hadoop]:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/alignment/AlignmentAnalysisTest.java#L333
Missing study when computing alignment index
|
|
AlignmentAnalysisTest.testNonReadOnlyCoverageIndex[hadoop]:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/alignment/AlignmentAnalysisTest.java#L361
Missing study when computing alignment index
|
|
AlignmentAnalysisTest.testReadOnlyCoverageIndex[hadoop]:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/alignment/AlignmentAnalysisTest.java#L402
Missing study when computing alignment index
|
|
AlignmentAnalysisTest.testNonReadOnlyAlignmentIndex[hadoop]:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/alignment/AlignmentAnalysisTest.java#L304
Missing study when computing alignment index
|
|
ExomiserInterpretationAnalysisTest.trioSingleExomiserAnalysis:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/clinical/exomiser/ExomiserInterpretationAnalysisTest.java#L198
org.opencb.opencga.catalog.exceptions.ResourceException: Resource 'EXOMISER_14_0_0_HG38' is not fetched yet (file '/opt/opencga/analysis/resources/exomiser/14.0.0/2402_hg38' is missing). Please fetch it first.
|
|
ExomiserInterpretationAnalysisTest.familyExomiserAnalysis:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/clinical/exomiser/ExomiserInterpretationAnalysisTest.java#L149
org.opencb.opencga.catalog.exceptions.ResourceException: Resource 'EXOMISER_14_0_0_HG38' is not fetched yet (file '/opt/opencga/analysis/resources/exomiser/14.0.0/2402_hg38' is missing). Please fetch it first.
|
|
ExomiserInterpretationAnalysisTest.singleExomiserAnalysis:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/clinical/exomiser/ExomiserInterpretationAnalysisTest.java#L102
org.opencb.opencga.catalog.exceptions.ResourceException: Resource 'EXOMISER_14_0_0_HG38' is not fetched yet (file '/opt/opencga/analysis/resources/exomiser/14.0.0/2402_hg38' is missing). Please fetch it first.
|
|
VariantManagerFetchTest.testQueryProject:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantManagerFetchTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
|
|
VariantManagerFetchTest.testQueryAnonymousWithoutPermissions:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantManagerFetchTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
|
|
VariantManagerFetchTest.testQueryAnonymousOnlyAggregated:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantManagerFetchTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
|
|
VariantManagerFetchTest.testQueryAnonymousOneStudyPermissionsIncludeBoth:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantManagerFetchTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
|
|
VariantManagerFetchTest.testQueryAnonymousTwoStudiesPermissions:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantManagerFetchTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
|
|
VariantManagerFetchTest.testCount:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantManagerFetchTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
|
|
VariantManagerFetchTest.testQuery:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantManagerFetchTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
|
|
VariantManagerFetchTest.testCheckSamplePermissionNonIndexedSamples:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantManagerFetchTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
|
|
VariantManagerFetchTest.testQueryExcludeSamples:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantManagerFetchTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
|
|
VariantManagerFetchTest.testQueryAnonymousViewSampleVariantsStudyLevel:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantManagerFetchTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
|
|
VariantManagerFetchTest.testQueryExcludeStudies:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantManagerFetchTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
|
|
VariantManagerFetchTest.testQueryAnonymousViewSampleVariants:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantManagerFetchTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
|
|
VariantManagerFetchTest.testQueryAnonymousInMembersWithoutPermissions:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantManagerFetchTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
|
|
VariantManagerFetchTest.testQueryAnonymousViewSampleVariantsWithoutAggregatedVariantsFail1:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantManagerFetchTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
|
|
VariantManagerFetchTest.testQueryAnonymousViewSampleVariantsWithoutAggregatedVariantsFail2:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantManagerFetchTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
|
|
VariantManagerFetchTest.testQueryAnonymousOneStudyPermissions:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantManagerFetchTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
|
|
VariantManagerFetchTest.testQueryAnonymousViewSampleVariantsWithoutAggregatedVariants:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantManagerFetchTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
|
|
VariantOperationsTest.testSetup[dummy]:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantOperationsTest.java#L336
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.VariantOperationsTest.testSetup(VariantOperationsTest.java:336)
|
|
VariantOperationsTest.testSetup[hadoop]:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantOperationsTest.java#L336
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.VariantOperationsTest.testSetup(VariantOperationsTest.java:336)
|
|
VariantStorageManagerTest.testConfigureSampleIndex:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantStorageManagerTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
|
|
VariantStorageManagerTest.testGetIndexedSamples:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantStorageManagerTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
|
|
VariantStorageManagerTest.testConfigure:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantStorageManagerTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
|
|
VariantStorageManagerTest.testConfigureProtectedValues:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantStorageManagerTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
|
|
AnalysisFileIndexerAggregatedTest.testIndexWithAggregatedStats:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/operations/AnalysisFileIndexerAggregatedTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
|
|
AnnotationVariantStorageTest.testAnnotateDefault:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/operations/AnnotationVariantStorageTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
|
|
AnnotationVariantStorageTest.testAnnotateRegion:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/operations/AnnotationVariantStorageTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
|
|
AnnotationVariantStorageTest.testAnnotateCreateAndLoad:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/operations/AnnotationVariantStorageTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
|
|
AnnotationVariantStorageTest.testAnnotateProject:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/operations/AnnotationVariantStorageTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
|
|
AnnotationVariantStorageTest.testCustomAnnotation:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/operations/AnnotationVariantStorageTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
|
|
AnnotationVariantStorageTest.testAnnotateCreateAndLoadExternal:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/operations/AnnotationVariantStorageTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
|
|
PlatinumFileIndexerTest.testBatchFromDirectory:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/operations/PlatinumFileIndexerTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
|
|
PlatinumFileIndexerTest.testBatch:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/operations/PlatinumFileIndexerTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
|
|
PlatinumFileIndexerTest.testLauncher:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/operations/PlatinumFileIndexerTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
|
|
PlatinumFileIndexerTest.testByStepsMultiRelease:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/operations/PlatinumFileIndexerTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
|
|
PlatinumFileIndexerTest.testBySteps:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/operations/PlatinumFileIndexerTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
|
|
PlatinumFileIndexerTest.testIndexFamily:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/operations/PlatinumFileIndexerTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
|
|
PlatinumFileIndexerTest.testBatchBySteps:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/operations/PlatinumFileIndexerTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
|
|
RemoveVariantsTest.testLoadAndRemoveOne:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/operations/RemoveVariantsTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
|
|
RemoveVariantsTest.testLoadAndRemoveDifferentChromosomes:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/operations/RemoveVariantsTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
|
|
RemoveVariantsTest.testLoadAndRemoveForce:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/operations/RemoveVariantsTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
|
|
RemoveVariantsTest.testLoadAndRemoveStudy:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/operations/RemoveVariantsTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
|
|
RemoveVariantsTest.testLoadAndRemoveMany:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/operations/RemoveVariantsTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
|
|
RemoveVariantsTest.testLoadAndRemoveOneWithOtherLoaded:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/operations/RemoveVariantsTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
|
|
AlignmentAnalysisTest.testReadOnlyAlignmentIndex[hadoop]:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/alignment/AlignmentAnalysisTest.java#L333
Missing study when computing alignment index
|
|
AlignmentAnalysisTest.testNonReadOnlyCoverageIndex[hadoop]:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/alignment/AlignmentAnalysisTest.java#L361
Missing study when computing alignment index
|
|
AlignmentAnalysisTest.testReadOnlyCoverageIndex[hadoop]:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/alignment/AlignmentAnalysisTest.java#L402
Missing study when computing alignment index
|
|
AlignmentAnalysisTest.testNonReadOnlyAlignmentIndex[hadoop]:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/alignment/AlignmentAnalysisTest.java#L304
Missing study when computing alignment index
|
|
ExomiserInterpretationAnalysisTest.trioSingleExomiserAnalysis:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/clinical/exomiser/ExomiserInterpretationAnalysisTest.java#L198
org.opencb.opencga.catalog.exceptions.ResourceException: Resource 'EXOMISER_14_0_0_HG38' is not fetched yet (file '/opt/opencga/analysis/resources/exomiser/14.0.0/2402_hg38' is missing). Please fetch it first.
|
|
ExomiserInterpretationAnalysisTest.familyExomiserAnalysis:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/clinical/exomiser/ExomiserInterpretationAnalysisTest.java#L149
org.opencb.opencga.catalog.exceptions.ResourceException: Resource 'EXOMISER_14_0_0_HG38' is not fetched yet (file '/opt/opencga/analysis/resources/exomiser/14.0.0/2402_hg38' is missing). Please fetch it first.
|
|
ExomiserInterpretationAnalysisTest.singleExomiserAnalysis:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/clinical/exomiser/ExomiserInterpretationAnalysisTest.java#L102
org.opencb.opencga.catalog.exceptions.ResourceException: Resource 'EXOMISER_14_0_0_HG38' is not fetched yet (file '/opt/opencga/analysis/resources/exomiser/14.0.0/2402_hg38' is missing). Please fetch it first.
|
|
VariantManagerFetchTest.testQueryProject:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantManagerFetchTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
|
|
VariantManagerFetchTest.testQueryAnonymousWithoutPermissions:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantManagerFetchTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
|
|
VariantManagerFetchTest.testQueryAnonymousOnlyAggregated:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantManagerFetchTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
|
|
VariantManagerFetchTest.testQueryAnonymousOneStudyPermissionsIncludeBoth:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantManagerFetchTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
|
|
VariantManagerFetchTest.testQueryAnonymousTwoStudiesPermissions:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantManagerFetchTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
|
|
VariantManagerFetchTest.testCount:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantManagerFetchTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
|
|
VariantManagerFetchTest.testQuery:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantManagerFetchTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
|
|
VariantManagerFetchTest.testCheckSamplePermissionNonIndexedSamples:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantManagerFetchTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
|
|
VariantManagerFetchTest.testQueryExcludeSamples:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantManagerFetchTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
|
|
VariantManagerFetchTest.testQueryAnonymousViewSampleVariantsStudyLevel:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantManagerFetchTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
|
|
VariantManagerFetchTest.testQueryExcludeStudies:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantManagerFetchTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
|
|
VariantManagerFetchTest.testQueryAnonymousViewSampleVariants:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantManagerFetchTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
|
|
VariantManagerFetchTest.testQueryAnonymousInMembersWithoutPermissions:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantManagerFetchTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
|
|
VariantManagerFetchTest.testQueryAnonymousViewSampleVariantsWithoutAggregatedVariantsFail1:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantManagerFetchTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
|
|
VariantManagerFetchTest.testQueryAnonymousViewSampleVariantsWithoutAggregatedVariantsFail2:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantManagerFetchTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
|
|
VariantManagerFetchTest.testQueryAnonymousOneStudyPermissions:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantManagerFetchTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
|
|
VariantManagerFetchTest.testQueryAnonymousViewSampleVariantsWithoutAggregatedVariants:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantManagerFetchTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
|
|
VariantOperationsTest.testSetup[dummy]:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantOperationsTest.java#L336
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.VariantOperationsTest.testSetup(VariantOperationsTest.java:336)
|
|
VariantOperationsTest.testSetup[hadoop]:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantOperationsTest.java#L336
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.VariantOperationsTest.testSetup(VariantOperationsTest.java:336)
|
|
VariantStorageManagerTest.testConfigureSampleIndex:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantStorageManagerTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
|
|
VariantStorageManagerTest.testGetIndexedSamples:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantStorageManagerTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
|
|
VariantStorageManagerTest.testConfigure:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantStorageManagerTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
|
|
VariantStorageManagerTest.testConfigureProtectedValues:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/VariantStorageManagerTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
|
|
AnalysisFileIndexerAggregatedTest.testIndexWithAggregatedStats:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/operations/AnalysisFileIndexerAggregatedTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
|
|
AnnotationVariantStorageTest.testAnnotateDefault:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/operations/AnnotationVariantStorageTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
|
|
AnnotationVariantStorageTest.testAnnotateRegion:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/operations/AnnotationVariantStorageTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
|
|
AnnotationVariantStorageTest.testAnnotateCreateAndLoad:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/operations/AnnotationVariantStorageTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
|
|
AnnotationVariantStorageTest.testAnnotateProject:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/operations/AnnotationVariantStorageTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
|
|
AnnotationVariantStorageTest.testCustomAnnotation:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/operations/AnnotationVariantStorageTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
|
|
AnnotationVariantStorageTest.testAnnotateCreateAndLoadExternal:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/operations/AnnotationVariantStorageTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
|
|
PlatinumFileIndexerTest.testBatchFromDirectory:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/operations/PlatinumFileIndexerTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
|
|
PlatinumFileIndexerTest.testBatch:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/operations/PlatinumFileIndexerTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
|
|
PlatinumFileIndexerTest.testLauncher:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/operations/PlatinumFileIndexerTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
|
|
PlatinumFileIndexerTest.testByStepsMultiRelease:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/operations/PlatinumFileIndexerTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
|
|
PlatinumFileIndexerTest.testBySteps:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/operations/PlatinumFileIndexerTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
|
|
PlatinumFileIndexerTest.testIndexFamily:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/operations/PlatinumFileIndexerTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
|
|
PlatinumFileIndexerTest.testBatchBySteps:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/operations/PlatinumFileIndexerTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
|
|
RemoveVariantsTest.testLoadAndRemoveOne:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/operations/RemoveVariantsTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
|
|
RemoveVariantsTest.testLoadAndRemoveDifferentChromosomes:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/operations/RemoveVariantsTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
|
|
RemoveVariantsTest.testLoadAndRemoveForce:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/operations/RemoveVariantsTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
|
|
RemoveVariantsTest.testLoadAndRemoveStudy:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/operations/RemoveVariantsTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
|
|
RemoveVariantsTest.testLoadAndRemoveMany:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/operations/RemoveVariantsTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
|
|
RemoveVariantsTest.testLoadAndRemoveOneWithOtherLoaded:
opencga-analysis/src/test/java/org/opencb/opencga/analysis/variant/manager/operations/RemoveVariantsTest.java#L1
java.lang.NullPointerException
at org.opencb.opencga.analysis.variant.manager.operations.AbstractVariantOperationManagerTest.setUpAbstract(AbstractVariantOperationManagerTest.java:162)
|
Artifacts
Produced during runtime
| Name | Size | |
|---|---|---|
|
build-folder
|
916 MB |
|