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base repository: pnnl/hundo
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base: 1.2.5
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head repository: pnnl/hundo
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compare: master
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  • 6 commits
  • 3 files changed
  • 2 contributors

Commits on Jul 8, 2019

  1. bump blast to 2.9.0

    @colinbrislawn
    colinbrislawn authored Jul 8, 2019

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    7d41b84 View commit details

  2. patch version after blast bump fixes #22

    @colinbrislawn
    colinbrislawn authored Jul 8, 2019
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    42574f4 View commit details

Commits on Aug 5, 2019

  1. pins multiple python packages

    @brwnj
    brwnj committed Aug 5, 2019
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    a1e6b09 View commit details

  2. updates versions

    @brwnj
    brwnj committed Aug 5, 2019
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    c3fa596 View commit details

  3. bumps version

    @brwnj
    brwnj committed Aug 5, 2019
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Commits on Aug 8, 2019

  1. Update setup.py

    @brwnj
    brwnj authored Aug 8, 2019
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Showing with 9 additions and 7 deletions.
  1. +1 −1 hundo/__init__.py
  2. +7 −5 hundo/environment.yml
  3. +1 −1 setup.py
2 changes: 1 addition & 1 deletion hundo/__init__.py
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Original file line number Diff line number Diff line change
@@ -1 +1 @@
__version__ = "1.2.5"
__version__ = "1.2.8"
12 changes: 7 additions & 5 deletions hundo/environment.yml
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Original file line number Diff line number Diff line change
@@ -4,20 +4,22 @@ channels:
- bioconda
- defaults
dependencies:
- python>=3.6
- python>=3.7
- bbmap=37.17
- biom-format=2.1.6
- biopython
- blast=2.6.0
- biom-format=2.1.7
- biopython=1.74
- blast=2.9.0
- bzip2=1.0.6
- click=6.7
- docutils=0.14
- mafft=7.313
- fasttree=2.1.10
- numpy>=1.14.0
- numpy=1.16.2
- pandas=0.24.2
- pigz=2.3.4
- pyyaml>=3.12
- scipy=1.2.1
- six=1.12.0
- vsearch=2.6.0
- zip=3.0
- pip
2 changes: 1 addition & 1 deletion setup.py
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Original file line number Diff line number Diff line change
@@ -23,7 +23,7 @@ def get_version(relpath):
url='https://github.com/pnnl/hundo',
license='MIT',
author='Joe Brown',
author_email='joe.brown@pnnl.gov',
author_email='brwnjm@gmail.com',
description='Amplicon processing protocol',
long_description=long_description,
packages=['hundo'],