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lgatto committed Dec 26, 2023
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11 changes: 6 additions & 5 deletions DESCRIPTION
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Description: MsCoreUtils defines low-level functions for mass
spectrometry data and is independent of any high-level data
structures. These functions include mass spectra processing
functions (noise estimation, smoothing, binning), quantitative
aggregation functions (median polish, robust summarisation, ...),
missing data imputation, data normalisation (quantiles, vsn, ...)
as well as misc helper functions, that are used across high-level
data structure within the R for Mass Spectrometry packages.
functions (noise estimation, smoothing, binning, baseline
estimation), quantitative aggregation functions (median polish,
robust summarisation, ...), missing data imputation, data
normalisation (quantiles, vsn, ...), misc helper functions, that
are used across high-level data structure within the R for Mass
Spectrometry packages.
Authors@R: c(person(given = "RforMassSpectrometry Package Maintainer",
email = "[email protected]",
role = "cre"),
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19 changes: 9 additions & 10 deletions README.md
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[![build devel](http://bioconductor.org/shields/build/devel/bioc/MsCoreUtils.svg)](https://bioconductor.org/checkResults/devel/bioc-LATEST/MsCoreUtils/)


`MsCoreUtils` defines low-level functions for mass spectrometry data and is
independent of any high-level data structures.
These functions include mass spectra processing functions
(noise estimation, smoothing, binning),
quantitative aggregation functions (median polish, robust summarisation, ...),
missing data imputation, data normalisation (quantiles, vsn, ...)
as well as misc helper functions, that are used across high-level
data structure within the
[R for Mass Spectrometry packages](https://www.rformassspectrometry.org/pkgs/).
`MsCoreUtils` defines low-level functions for mass spectrometry data
and is independent of any high-level data structures. These functions
include mass spectra processing functions (noise estimation,
smoothing, binning, baseline estimation), quantitative aggregation
functions (median polish, robust summarisation, ...), missing data
imputation, data normalisation (quantiles, vsn, ...) as well as misc
helper functions, that are used across high-level data structure
within the [R for Mass Spectrometry
packages](https://www.rformassspectrometry.org/pkgs/).

See the package [homepage](https://rformassspectrometry.github.io/MsCoreUtils)
for more information.
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BiocManager::install("MsCoreUtils")
```


# Contributions

Contributions are highly welcome and should follow the [contribution
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4 changes: 4 additions & 0 deletions pkgdown/_pkgdown.yml
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contents:
- noise
- smooth
- title: "Baseline estimation"
desc: "Spectrum intensity baseline estimation."
contents:
- estimateBaseline
- title: "Coerce Functions"
desc: "Functions for converting objects."
contents:
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