Minor changes to log statements

run.sh

@@ -1,7 +1,7 @@
 cd src/vcf_generator/version3/
 PYTHONPATH=../../common/ python3 vcf_generator_ver3.py
 
-echo 'INFO: output file present at location - data/output/'
+echo 'INFO : output file present at location - data/output/'
 
 cd ../../common/
 

setup.sh

@@ -1,5 +1,5 @@
-echo "INFO: Starting the setup for vcf-generator"
-echo "INFO: Checking scripts and files status"
+echo "INFO : Starting the setup for vcf-generator"
+echo "INFO : Checking scripts and files status"
 
 cd data/
 
@@ -10,50 +10,50 @@ GENES_37="strandomics_input_data/GrCh37/genes.tsv"
 GENES_38="strandomics_input_data/GrCh38/genes_38.tsv"
 
 if [[ -f $GENES_37 ]]; then
-	echo "SUCCESS: GrCh37 genes.tsv file present"
+	echo "SUCCESS : GrCh37 genes.tsv file present"
 else
-	echo "FAIL: GrCh37 genes.tsv file absent"
+	echo "FAIL : GrCh37 genes.tsv file absent"
 fi
 
 if [[ -f $GENES_38 ]]; then
-	echo "SUCCESS: GrCh38 genes_38.tsv file present"
+	echo "SUCCESS : GrCh38 genes_38.tsv file present"
 else
-	echo "FAIL: GrCh38 genes_38.tsv file absent"
+	echo "FAIL : GrCh38 genes_38.tsv file absent"
 fi
 
 if [[ -f vcf_template/vcf_template.vcf ]]; then
-	echo "SUCCESS: VCF template file present"
+	echo "SUCCESS : VCF template file present"
 else
-	echo "FAIL: VCF template file absent"
+	echo "FAIL : VCF template file absent"
 fi
 
-echo "INFO: The binary human genome reference data to be downloaded"
+echo "INFO : The binary human genome reference data to be downloaded"
 
 if [[ ! -f $HG_19 ]]; then
-	echo "INFO: Begining the download of GrCh37 data - hg19.2bit....."
+	echo "INFO : Begining the download of GrCh37 data - hg19.2bit....."
 	wget http://hgdownload.cse.ucsc.edu/goldenpath/hg19/bigZips/hg19.2bit
-	echo "INFO: Download of GrCh37 data - hg19.2bit ends"
+	echo "INFO : Download of GrCh37 data - hg19.2bit ends"
 	mv hg19.2bit human_genome_data/GrCh37/
 fi
 
 if [[ -f $HG_19 ]]; then
-	echo "SUCCESS: hg19.2bit file downloaded and placed in appropriate location"
+	echo "SUCCESS : hg19.2bit file downloaded and placed in appropriate location"
 else
-	echo "FAIL: hg19.2bit file absent"
+	echo "FAIL : hg19.2bit file absent"
 fi
 
 if [[ ! -f $HG_38 ]]; then
-	echo "INFO: Begining the download of GrCh38 data - hg38.2bit....."
+	echo "INFO : Begining the download of GrCh38 data - hg38.2bit....."
 	wget http://hgdownload.cse.ucsc.edu/goldenpath/hg38/bigZips/hg38.2bit
-	echo "INFO: Download of GrCh38 data - hg38.2bit ends"
+	echo "INFO : Download of GrCh38 data - hg38.2bit ends"
 	mv hg38.2bit human_genome_data/GrCh38/
 fi
 
 if [[ -f $HG_38 ]]; then
-	echo "SUCCESS: hg38.2bit file downloaded and placed in appropriate location"
+	echo "SUCCESS : hg38.2bit file downloaded and placed in appropriate location"
 else
-	echo "FAIL: hg38.2bit file absent"
+	echo "FAIL : hg38.2bit file absent"
 fi
 
-echo "INFO: All input files successfully present"
+echo "INFO : All input files successfully present"