Skip to content

Commit

Permalink
Added link to resonance test image and instructions on how to run test.
Browse files Browse the repository at this point in the history
  • Loading branch information
siboles committed Apr 7, 2022
1 parent e03abe5 commit 761d0ad
Showing 1 changed file with 19 additions and 0 deletions.
19 changes: 19 additions & 0 deletions README.md
Original file line number Diff line number Diff line change
Expand Up @@ -18,3 +18,22 @@ By using custom mechanical testing systems that allow for sample imaging while u
![image](doc/deforming.gif)

From the grid vertex displacements, lsmgridtrack automatically calculates the deformation gradient at each grid cell centroid. From the deformation gradient, any kinematic variable can be determined. The Green-Lagrange strains, principal strains, maximum shear strains, and volumetric strains are calculated automatically. These can then be saved in different formats, such as a VTK image.

TESTING
=======

Resonanced-scanned Images
-------------------------
To test the application of lsmgridtrack registration on lower quality images acquired
using a resonance scanning protocol first download the test image from

[![DOI](https://zenodo.org/badge/DOI/10.5281/zenodo.6423385.svg)](https://doi.org/10.5281/zenodo.6423385)

In a directory where writing multiple output files is acceptable execute the command:

```
python -m lsmgridtrack.test.test_random_resonance PATH_TO_IMAGE_FILE N
```

substituting the path and filename of the downloaded test image for PATH_TO_IMAGE_FILE and
how many random deformations of the image to test for N.

0 comments on commit 761d0ad

Please sign in to comment.