Update station_obj_from_row

- make logic depend on mth5 file version
- re-add jupyter notebooks to tests to see if this has any effect there

.github/workflows/tests.yml

@@ -43,23 +43,23 @@ jobs:
         pip install -e .
         conda list
         
-#    - name: Install Jupyter and dependencies
-#      run: |
-#        pip install jupyter
-#        pip install ipykernel
-#        python -m ipykernel install --user --name aurora-test
-#        # Install any other dependencies you need
+    - name: Install Jupyter and dependencies
+      run: |
+        pip install jupyter
+        pip install ipykernel
+        python -m ipykernel install --user --name aurora-test
+        # Install any other dependencies you need
 
-#    - name: Execute Jupyter Notebooks
-#      run: |
-#        jupyter nbconvert --to notebook --execute docs/examples/dataset_definition.ipynb
-#        jupyter nbconvert --to notebook --execute docs/examples/make_cas04_single_station_h5.ipynb
-#        jupyter nbconvert --to notebook --execute docs/examples/operate_aurora.ipynb
-#        jupyter nbconvert --to notebook --execute tests/test_run_on_commit.ipynb
-#        jupyter nbconvert --to notebook --execute tutorials/pole_zero_fitting/lemi_pole_zero_fitting_example.ipynb
-#        jupyter nbconvert --to notebook --execute tutorials/processing_configuration.ipynb
-#        jupyter nbconvert --to notebook --execute tutorials/synthetic_data_processing.ipynb
-#        # Replace "notebook.ipynb" with your notebook's filename
+    - name: Execute Jupyter Notebooks
+      run: |
+        jupyter nbconvert --to notebook --execute docs/examples/dataset_definition.ipynb
+        jupyter nbconvert --to notebook --execute docs/examples/make_cas04_single_station_h5.ipynb
+        jupyter nbconvert --to notebook --execute docs/examples/operate_aurora.ipynb
+        jupyter nbconvert --to notebook --execute tests/test_run_on_commit.ipynb
+        jupyter nbconvert --to notebook --execute tutorials/pole_zero_fitting/lemi_pole_zero_fitting_example.ipynb
+        jupyter nbconvert --to notebook --execute tutorials/processing_configuration.ipynb
+        jupyter nbconvert --to notebook --execute tutorials/synthetic_data_processing.ipynb
+        # Replace "notebook.ipynb" with your notebook's filename
 
 #    - name: Commit changes (if any)
 #      run: |

aurora/pipelines/process_mth5.py

@@ -106,12 +106,11 @@ def station_obj_from_row(row):
     station_obj:
 
     """
-    if row.survey == "none":
+    if row.mth5_obj.file_version == "0.1.0":
         station_obj = row.mth5_obj.stations_group.get_station(row.station_id)
-    else:
-        station_obj = row.mth5_obj.stations_group.get_station(
-            row.station_id, survey=row.survey
-        )
+    elif row.mth5_obj.file_version == "0.1.0":
+        survey_group = row.mth5_obj.surveys_group.get_survey(row.survey)
+        station_obj = survey_group.stations_group.get_station(row.station_id)
     return station_obj