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Update to mzlib544 #137

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merged 2 commits into from
Dec 12, 2023
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trishorts
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@trishorts trishorts commented Dec 11, 2023

The full changelog for mzlib 544 can be found here:
smith-chem-wisc/mzLib@1.0.543...1.0.544

This PR fixes a bug in the output so that rows have the sample number of values as columns which can break certain downstream applications.

This PR addresses this issue: #134

Support for oligos in mzlib shouldn't change anything for FlashLFQ yet. But, we should plausibly be able to accommodate both peptides and oligos in some future incarnation.

@Alexander-Sol
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Ran this version with the vignette data, the output looks fine, we get the expected results.

However, the AllPeptides output still has an extra tab in the header.

@trishorts trishorts merged commit 81733b3 into smith-chem-wisc:master Dec 12, 2023
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4 participants