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v0.2.4 - 1/8/2021
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@guilhermesena1 guilhermesena1 released this 09 Jan 02:39
· 183 commits to master since this release
v0.2.4
b8319de

The correct files to download are either falco-0.2.4.zip or falco-0.2.4.tar.gz
Please do not download the "Source code" files automatically generated by github, as they do not contain all files necessary for compilation

This release resolves the following issues:

  • Memory usage for uncompressed FASTQ files has been drastically reduced by replacing memory mapping with standard C IO. versions <= 0.2.3 use most of the available memory in the system, whereas this version only uses about 92 MB for short reads and under 400 MB for long reads
  • Base groupping has been implemented for per base sequence content and per sequence N content modules, which also drastically reduced the output size of the HTML file and the text report, especially in long-read files. We opted to leave sequence length distribution without base groupping.
  • Fixed a bug in adapter content where certian long-read datasets were outputting nonsensical values.
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